Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1825 ATGTCTCTAAAAATAGCAGCAGAAGTTTATCCAAAATCACCATCAGAGACAGGGATGGAGCCTTTGGTGTTAGTAAAGGAATATGAAGAAGATAGACACAAGGTGGCAGTAGAGAAACTTGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCTTCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAATTGCATGCCATGCTAGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAGAACTAGCCTATATCTTGGGGCTCAGAGTCTCCCCTCGGCACAGGAGATTTGGCATTGGCACAAAACTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGTCTAAGTATGCATATATGGCAACTGATTGTACCAATGAACCATCCGTGAATTTGTTCACAAAAAAATGTGGTTACTCAAAGTTCAGGACTCTAACCATACTAGTGCAACCTGTGCATGCTCACTACAAGCCAATTAGCTCCAATGTTGCTGTGCTTCGCCTTCCGCCACGCCTAGCCGGGTCCATGTATAACCATATGTTTGCCAATTCAGAATTTTACCCTAAGGACATAGAGTTAATCTTGTCAAACAAGCTGAATTTGGGAACTTTCATGGCCATCCCAAAGAAGTACTTATCGAAATGTGATCCAAAAAGGGGCATTCTGCCTCCAAGCTATGCAATATTGAGTGTGTGGAACACCAAAGATGTGTTCAAGTTGCAAGTGAAGGGTGTGTCACCATGGGCACATGCTTGTTGCGTAGGTACAAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCATTTCCTGATGTTTTTAGGCCATTTGGGGTTTATTTTCTCTATGGACTACACATGGAGGGAAAGTGTGGTGCACAACTAATGAAGTCCCTGTGTGGATTTGTGCACAACATGGCTAGAGATGATGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTTAGAGACGCAGTCCCACATTGGAGAAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTGAGGACACTAAGAAGGATATCCAAGAATCTGATTGGTTCACTTCTAGATCCTCTTCGCCAGTGATATTTGTTGATCCTCGAGATTTTTGA 1212 0.4431 MSLKIAAEVYPKSPSETGMEPLVLVKEYEEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHAMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVELAYILGLRVSPRHRRFGIGTKLVEHLEEWCKQKGSKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYNHMFANSEFYPKDIELILSNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPWAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKCGAQLMKSLCGFVHNMARDDGGCGAIVAELGQRDPVRDAVPHWRKFSWAEDMWCIKNLEDTKKDIQESDWFTSRSSSPVIFVDPRDF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1825 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Gso8g1825 403 CDD NAT_SF 74 144 - -
Gso8g1825 403 PANTHER OS12G0561600 PROTEIN 1 403 - -
Gso8g1825 403 Gene3D - 24 169 - -
Gso8g1825 403 Pfam Acetyltransferase (GNAT) family 73 164 IPR000182 GO:0016407
Gso8g1825 403 PANTHER N-ACETYLTRANSFERASE 1 403 - -
Gso8g1825 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1825 Gso-Chr8 17882307 17884849 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso8g1825 Acetyltransf_1 4e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1825 - - gmx:100802670 828.935