Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1819 ATGGATCCAGAAAACCAACTCACCTCTAACCCGAGAAGCATAATCTTGAACAAGTACGAGATGGGGCGGGTCCTGGGCCAAGGAAACTTCGCCAAAGTCTACCACGGCCGAAACCTCAACACCAACGAGAGCGTCGCCATCAAAGTCATCAAGAAAGAGAAGCTCAAAAAGGAACGACTCGTCAAGCAGATCAAGCGCGAGGTGTCGGTGATGAAACTCGTCCGCCACCCCCACATCGTTGAACTCAAGGAAGTCATGGCCACCAAAGGAAAAATCTTCCTCGTCATGGAATACGTCAATGGCGGTGAACTCTTCGCCAAAGTCAACAATGGAAAACTCACCGAAGATCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTAGACCAAAACGAAGACCTTAAAGTCTCCGACTTCGGACTCTCCGCTCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCTTAACCCCGTGTGGGACCCCTGCTTACGTGGCACCCGAGGTCTTAAAGAAAAAAGGTTACGACGGTTCAAAGGCTGATATATGGTCCTGTGGGGTTATCCTCTTCGCTTTGCTCTGTGGCTATTTACCCTTCCAAGGTGAGAATGTTATGAGAATTTACCGAAAGGCTTTCAGAGCTGAATATGAATTTCCAGAATGGATTTCAACTCAGGCCAAGAATCTTATTTCGAAACTCCTCGTTGCTGATCCTGGGAAGAGGTATTCTATTCCTGATATAATGAAGGATCCTTGGTTTCAAGTTGGGTTCATGAGACCAATTGCGTTTTCTATTAAGGAGTCTAACGTTGTTGAAGACAACGAGGGGAAACCTGCGAGGCCGTTTTACAATGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTTAGGAGTTTGTTTGAGACGAGGAAGCGGTCGCCATCGATGTTTATATCTAAATTCTCGGCTTCGGCGGTGTTGGCCAAGGTGGAGGCGGTGGCGAAGAAACTGAACTTTAGGGTGACGGGGAAGAAGGAGTTTGTGGTGAGGATGCAAGGGGCGGAGGAGGGGAGGAAGGGGAAGCTGGCAATGACGGTGGAGGTTTTCGAGGTGGCGCCGGAGGTGGCGGTGGTCGAGTTTTCTAAGTCTGCCGGAGATACGTTGGAGTATGTTAGGTTCTGTGATGAGCAAGTGAGGCCTTCTCTCAAAGACATTGTTTGGAGCTGGCAGGGTGATACCAACAGTTAA 1293 0.505 MDPENQLTSNPRSIILNKYEMGRVLGQGNFAKVYHGRNLNTNESVAIKVIKKEKLKKERLVKQIKREVSVMKLVRHPHIVELKEVMATKGKIFLVMEYVNGGELFAKVNNGKLTEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLCGYLPFQGENVMRIYRKAFRAEYEFPEWISTQAKNLISKLLVADPGKRYSIPDIMKDPWFQVGFMRPIAFSIKESNVVEDNEGKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASAVLAKVEAVAKKLNFRVTGKKEFVVRMQGAEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVRFCDEQVRPSLKDIVWSWQGDTNS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1819 430 ProSiteProfiles NAF domain profile. 298 323 IPR018451 GO:0007165
Gso8g1819 430 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1819 430 ProSitePatterns Protein kinases ATP-binding region signature. 25 52 IPR017441 GO:0005524
Gso8g1819 430 PANTHER CBL-INTERACTING PROTEIN KINASE 16 10 429 - -
Gso8g1819 430 CDD CIPK_C 304 418 - -
Gso8g1819 430 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Gso8g1819 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Gso8g1819 430 Gene3D Transferase(Phosphotransferase) domain 1 12 305 - -
Gso8g1819 430 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1819 430 Gene3D Kinase associated domain 1, KA1 306 423 - -
Gso8g1819 430 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1819 430 Coils Coil 47 67 - -
Gso8g1819 430 PANTHER - 10 429 - -
Gso8g1819 430 Pfam NAF domain 302 357 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1819 Gso-Chr8 17822011 17823917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1819 12 430 CBL-interacting serine-threonine protein kinases AT5G10930 62.299 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso8g1819 Pkinase 2.8e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1819 - - gmx:100801065 821.617