Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1817 ATGCCAACTGACACATCATCAGTTTCCGGCGGCGAAATCGTGTGTGTGACCGGTGCCGGCGGTTTCATAGCCTCTTGGCTTGTCAAACATCTCTTAGAGAAAGGCTACACTGTGAGAGGAACCGTGAGAAACCCAGATGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGAGGCAAGGAGAGGCTAACTCTGCATAAAGTTGATCTCTTCGATATTGACTCCATTAAAGAAGCTCTTAACGGTTGCCACGGTGTCTTCCACACCGCTTCTCCAGTCACCGACAACCCTGAAGAGATGGTAGAGCCAGCAGTGAATGGAACGAAGAATGTGATCACAGCAGCAGCAGAAGCAAAAGTGCGACGGGTGGTGTTCACTTCGTCAATTGGCACAGTCTACATGGACCCCAATACGAGTAGGGATGCGTTGGTCGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAGACGGTGGCAGAACAAACAGCATGGGATGTAGCAAAAGAGAGAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTATTGGACCGTTGTTGCAACCAACCATTAATGCTAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCCAAGACTTATGTAAATGCAACTCAGGCTTACATACATGTGAGGGATGTGGCATTAGCCCACATTCTTGTTTATGAGACACCTTCAGCTTCTGGTCGATACATATGTGCTGAAAGTTCGCTGCATCGTGGTGAGCTTGTTGAAATTTTGGCCAAGTTTTTTCCCGAGTACCCAATTCCTACCAAATGTTCAGATGAAAAGAATCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACCCCTGTGAAGCAGTGTCTATATGACACCGTTAAAAATCTTCAAGAGAACGGCCACCTTCCTGTCCCCCCAAAGCAAGAAGACTCCTATTGA 1002 0.4581 MPTDTSSVSGGEIVCVTGAGGFIASWLVKHLLEKGYTVRGTVRNPDDPKNGHLKELEGGKERLTLHKVDLFDIDSIKEALNGCHGVFHTASPVTDNPEEMVEPAVNGTKNVITAAAEAKVRRVVFTSSIGTVYMDPNTSRDALVDESFWSDLEYCKNTKNWYCYGKTVAEQTAWDVAKERGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYIHVRDVALAHILVYETPSASGRYICAESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYDTVKNLQENGHLPVPPKQEDSY* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1817 333 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Gso8g1817 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Gso8g1817 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 326 - -
Gso8g1817 333 CDD FR_SDR_e 14 301 - -
Gso8g1817 333 Gene3D - 3 333 - -
Gso8g1817 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1817 Gso-Chr8 17797395 17800598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1817 11 277 Monolignol Biosynthesis Gene Families AT1G80820 73.408 2.43e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1817 K09753 - gmx:100799994 672.159