Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1810 ATGAACAACGAGGAAGTCCCATCATTACCTTCCACACCTGCAACACCAGGGACTCCCGGTGCTCCTCTCTTTGGTGGCCTCAGGTTTGAGAAACCTAATGGTAGTGTTGTTAGGAAATCGTCCTTCCTCAAAAGTTGCAAATGTTTCAGTGTTGCAGAATGGACTTTAGAAGACGGGGCCATGCCTAGAGTCTCTTGCTCTTTACCATCCCCTCATATCCCTCTCGCAAAAAAGATTGGAGCTGAGTTTATTGGGACGTTCATTTTGATGTTTGCCGCAATAGGCACTGCTATTGTGAACCAAAAAACACATGGATCAGAAACTTTGATCGGATGTGCTGCAGCCAATGGACTTGCTGTCATGATTATCATTTTCTCTACGGGCCATATCTCCGGGGCTCATCTTAATCCCGCTGTCACCATTTCCTTTGCTGCATTAAAGCATTTCCCCTGGAAAAATGTGCCTGTGTATATTGGTACACAAGTTTTGGCATCAGTAAGTGCTGCATTTGCTCTGAAAGTGGTTTTTCATCCGTTCATGAGCGGTGGAGTGACGGTCCCTTCAGTGGGATATGGGCAAGCTTTCGCCACAGAGTTCATTGTCAGCTTTATTCTTATGTTCGTTGTGACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAGCTCGCGGGAATCGCGGTGGGAGCTACTGTCATGCTCAACATACTCATAGCCGGGCCAACAACTGGAAGTTCAATGAACCCGGTTAGAACATTGGGTCCAGCAATAGCTGCAAACAACTACAAGGGCATATGGGTCTATCTCATAGCTCCCATACTTGGAACTCTATGTGGGGCAGGTGCCTACACTGTGGTCAAGCTGCCTGAGGAAGAGGCAACAAAGACACCTTCTTCTGCTCCTAATGGGAGCTTCAGAAGGTGA 921 0.4788 MNNEEVPSLPSTPATPGTPGAPLFGGLRFEKPNGSVVRKSSFLKSCKCFSVAEWTLEDGAMPRVSCSLPSPHIPLAKKIGAEFIGTFILMFAAIGTAIVNQKTHGSETLIGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQVLASVSAAFALKVVFHPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPTTGSSMNPVRTLGPAIAANNYKGIWVYLIAPILGTLCGAGAYTVVKLPEEEATKTPSSAPNGSFRR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1810 306 PANTHER AQUAPORIN NIP2-1 3 292 IPR034294 -
Gso8g1810 306 SUPERFAMILY Aquaporin-like 72 292 IPR023271 -
Gso8g1810 306 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Gso8g1810 306 Pfam Major intrinsic protein 74 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 Gene3D Glycerol uptake facilitator protein. 70 298 IPR023271 -
Gso8g1810 306 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 PRINTS Major intrinsic protein family signature 197 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 PRINTS Major intrinsic protein family signature 228 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 PRINTS Major intrinsic protein family signature 265 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso8g1810 306 MobiDBLite consensus disorder prediction 1 23 - -
Gso8g1810 306 PANTHER BNAA02G36290D PROTEIN 3 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1810 Gso-Chr8 17720410 17725057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1810 1 306 Major Intrinsic Protein MIP AT1G80760 75.241 1.48e-158 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1810 K09874 - gmx:100798410 575.474