Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1791 ATGGAGGAGTCAGGGGAAAATTGGCCTTCCGATTCTTATTTAGATGACTTCGTCAACGATGATTTAGGTTTTGATGATGAAGAATTTGGTAGTGAAGATGATTCATTTTCTGGGATGGGCGAGACCGACAGAAAGAAGAGACAGCGAGAACTCACAGAGAGGTTCCTTGCACTTTCAGCCACCATACCAGGCTTCAAAAAGACGGACAAGACTTCCATCCTGGCCAATGCTAGCAGCTATGTGAAACAACTTCAGCAACGTGTGAGAGAGCTAGAGCAATTGCAAGAAGTTCAATCCAACGTTACTAGCAACGAAGGCGCCACCAGCTCTTGCGAAGTGAACTCATCATCCAATGATTATTACTGTGGTGGAGGAGGACCAAATGAAATTCTTCCAGAGGTCAAAGTAAGAGTGTTACAGAAGGAGGTTCTCATCATAATCCACTGTGAGAAACACAAGGGCATCATGCTCAAAATCCTTTCCCAGCTTGAAAATGTTAATCTCTCTATAGTCAATAGCAGCGTCTTACGATTTGGGAAATCCACTCTCGACATCACCATTGTTGCTCAGATGGGTGAGGGATACAAGATGACGGTGGATGAACTAGTGAAGACCCTGAGAGTAGCGATCTTGACTCATTAG 642 0.4439 MEESGENWPSDSYLDDFVNDDLGFDDEEFGSEDDSFSGMGETDRKKRQRELTERFLALSATIPGFKKTDKTSILANASSYVKQLQQRVRELEQLQEVQSNVTSNEGATSSCEVNSSSNDYYCGGGGPNEILPEVKVRVLQKEVLIIIHCEKHKGIMLKILSQLENVNLSIVNSSVLRFGKSTLDITIVAQMGEGYKMTVDELVKTLRVAILTH* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1791 213 PANTHER BHLH TRANSCRIPTION FACTOR 42 213 - -
Gso8g1791 213 MobiDBLite consensus disorder prediction 18 34 - -
Gso8g1791 213 Coils Coil 74 101 - -
Gso8g1791 213 Gene3D - 41 106 IPR036638 GO:0046983
Gso8g1791 213 SMART finulus 42 90 IPR011598 GO:0046983
Gso8g1791 213 MobiDBLite consensus disorder prediction 1 44 - -
Gso8g1791 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Gso8g1791 213 PANTHER PROTEIN, PUTATIVE-RELATED 42 213 - -
Gso8g1791 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 97 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1791 Gso-Chr8 17530411 17536111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1791 45 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.604 8.41e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1791 - - gmx:100527052 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1791 8 17530411 17536111 Gso11g3749 11 53085949 53090050 PCT