Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1774 ATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCACTCGCAGAAGGCGAGGGAAAGAACTACCAACATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCCACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGGAGCTTCGGCAGTGCGTACTGGGGCCAACTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACATAGCAGAGACGGAATTTACCGTTGAACTTGAAATATTGGCAAGAATACGACACAAGAATCTTCTCAGTCTCCGTGGCTACTGTGCTGAAGGACAGGAACGGTTAATTGTATACGAATATATGCAAAATTTGAGCCTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCTTCTTGATTGGAATCGGCGTATGAATATTGCAATTGGTTCTGCTGAAGGAATTGTGTATCTTCATCACCAAGCAACACCGCATATCATCCACAGGGATATTAAAGCAAGCAACGTGTTGCTGGATTCTGATTTCCGTGCTCGTGTTGCTGATTTCGGGTTTGCTAAGTTGATCCCTGACGGGGCAACGCATGTGACTACAAAAGTTAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCCATGTTAGGAAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGCATTCTCCTTCTAGAACTTGCCAGTGGCAAGAGACCAATTGAAAAGCTTAATTCGACGGTGAGGCGATCGATAGTTGATTGGGCATTGCCTTTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTGAATGGGAACTATGTGGAGGGAGAGCTTAAAAGGGTTGTTTTAGTTGCACTTATGTGTGCTCAGGATCTACCTGAGAAGAGACCGACCATGCTTGACGTGGTAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTATCACATAGAGAACAGTGAAATGCTCAGAAGCCTTCTAGCTGTAGAAAGCAATGATGAGACATCAGTGGCTGAAGAAGACAGTTTAGACTATATATCAGAAGAAAAAGAATTAGAACGTCCCTTGAAAGAGTATACTTAA 1092 0.4258 MAFWFCCGKVSTRRRRGKELPTWRVFSLKELHSATNNFNYDNKLGEGSFGSAYWGQLWDGSQIAVKRLKVWSNIAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFRARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKRPIEKLNSTVRRSIVDWALPLVCEKKFSEIADPRLNGNYVEGELKRVVLVALMCAQDLPEKRPTMLDVVELLKGESKDKFYHIENSEMLRSLLAVESNDETSVAEEDSLDYISEEKELERPLKEYT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1774 363 Pfam Protein kinase domain 39 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1774 363 Gene3D Phosphorylase Kinase; domain 1 9 113 - -
Gso8g1774 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Gso8g1774 363 PANTHER BNAA05G14800D PROTEIN 4 357 - -
Gso8g1774 363 SUPERFAMILY Protein kinase-like (PK-like) 20 309 IPR011009 -
Gso8g1774 363 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Gso8g1774 363 SMART serkin_6 38 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1774 363 Gene3D Transferase(Phosphotransferase) domain 1 114 327 - -
Gso8g1774 363 ProSiteProfiles Protein kinase domain profile. 38 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1774 363 PANTHER OS01G0750732 PROTEIN 4 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1774 Gso-Chr8 17285876 17289889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1774 25 305 Trihelix Transcription Factor Family AT1G68690 48.070 2.50e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gso8g1774 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1774 - - gmx:100791193 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0069 15 588821 591821 Gso8g1774 8 17285876 17289889 PCT
Gso11g3728 11 52872519 52875525 Gso8g1774 8 17285876 17289889 PCT
Gso8g1774 8 17285876 17289889 Gso15g0069 15 588821 591821 PCT
Gso8g1774 8 17285876 17289889 Gso11g3728 11 52872519 52875525 PCT