Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1729 ATGAAGAAAGAAAACAGTGTTACGCTGAAAGCTGGGGAGCTCCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTGCTCTTCGTGCATCTGGACAGCTACCCCCTTTGAAAGAGAGAGCACAGCAAAATCAGAATCTGTTATCCAAAGTCAATTCAAAAGGAGCAGTTTCTGATAATACATGTCTTCAGCGTAAAAGGAAGGCTGTTCTTCAGGAAGTTACTAATGTTTGCCGTGAAAATGCATACAAGGGTTGTTTCAACTCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGGCTGGTCAAATTAATGTGTCCAAAGTGGCTCCTTCTGTTACTGTTGACTCCAAAGCAAAGGAAACAGCATTGCAATCGGAAGATACTATGTGCTCAATTAATTTGGAAAACAATGAATTTCTACGACTGAGTGCTAATGATTGTAGATTGCCTGAAAGTCAGATGTCTGGAATATCTGCTCATCCTTTGATTTCTCAGAAGAAAGACAAGAAAGATAACCTTCCAAAACTTTTGACTGCATTGAAGGATCCAGACATCACTAATATAGATGATGATGATCTTGAAGATCCTCAATCTTGCAGCCTCTATGCTGCTGATATCTACGACACCATGCGTGTTGCTGAGCTTGCAAGAAGGCCTCATCCGAACTTTATGGAGACAGTGCAGCGAGATATTACTCAAAGCATGCGTGGAATACTGGTTGACTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTTACAGACACTCTTTACCTCACTGTGTATCTCATAGATTGGTTTCTGTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCACGTATTGAAGATTTCTGCTTCATCACAGACAATACATACACGAAAGCTGAGGTACTAAAAATGGAGAGACAAGTGTTGAAGTCGTCTGAATATCAACTGTTTGCTCCCACTATACAAACTTTCGTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGACCAAAGCCTTGAATTGGAGTACCTGGCCAATTACCTAGCTGAACTAACACTGATGGACTATGGTTTCTTGAATTTCCTTCCCTCTATCATTGCTGCATCAGCTGTATTTCTTGCAAGGTGGACACTAGATCAGTCAAACCACCCATGGAATCCAACTCTTCAACACTATGCCTGTTACAAAGCTTCAGATTTGAAAACCACAGTTCTTGCATTACAAGACCTACAGCTGAATACTGATGGCTGTCCTCTAACTGCCGTCCGCACGAAATACAGACAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCACCAAAACTGCTTGAAACTTTGTTCTGA 1398 0.4185 MKKENSVTLKAGELPGRLTRARAAAALRASGQLPPLKERAQQNQNLLSKVNSKGAVSDNTCLQRKRKAVLQEVTNVCRENAYKGCFNSTKIQAKKSKLAKAGQINVSKVAPSVTVDSKAKETALQSEDTMCSINLENNEFLRLSANDCRLPESQMSGISAHPLISQKKDKKDNLPKLLTALKDPDITNIDDDDLEDPQSCSLYAADIYDTMRVAELARRPHPNFMETVQRDITQSMRGILVDWLVEVSEEYKLVTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMERQVLKSSEYQLFAPTIQTFVRRFLRAAQASYKDQSLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQHYACYKASDLKTTVLALQDLQLNTDGCPLTAVRTKYRQDKFKCVAALSSPKLLETLF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1729 465 PANTHER CYCLIN-A2-4 46 465 - -
Gso8g1729 465 SMART cyclin_7 339 427 IPR013763 -
Gso8g1729 465 SMART cyclin_7 242 326 IPR013763 -
Gso8g1729 465 Gene3D - 206 454 - -
Gso8g1729 465 Gene3D - 220 333 - -
Gso8g1729 465 Pfam Cyclin, C-terminal domain 335 457 IPR004367 -
Gso8g1729 465 CDD CYCLIN 236 325 IPR013763 -
Gso8g1729 465 SUPERFAMILY Cyclin-like 195 331 IPR036915 -
Gso8g1729 465 Pfam Cyclin, N-terminal domain 206 331 IPR006671 -
Gso8g1729 465 PANTHER CYCLINS 46 465 IPR039361 -
Gso8g1729 465 SUPERFAMILY Cyclin-like 335 460 IPR036915 -
Gso8g1729 465 CDD CYCLIN 335 425 IPR013763 -
Gso8g1729 465 SMART Cyclin_C_2 335 458 IPR004367 -
Gso8g1729 465 PIRSF Cyclin_A_B_D_E 13 464 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1729 Gso-Chr8 16896197 16902600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1729 1 465 Core Cell Cycle Gene Families AT1G80370 54.043 2.69e-165 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1729 K06627 - gmx:100793657 877.47