Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1721 ATGGGTGTGAACTCTTACTCCAACAGTAGAGTTGAGCACCTAGCTTGCAACAACAATGGTAGTAACAATAACATGAAGATCCAAGCTGAGATACAAATGCCACCCTTGGAAATTCACAAGGTTCGGTTGCCACCAGAACGCACCACCTTGCAGAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCAGATGATCCACTCCACAGGTTCAAGAACCAAACATGCCTCATGAAGCTCCTCCTTGCACTTCAATATTTCTTCCCCATTTTTCAATGGGCCCCTCACTACAACCTCTCCCTTCTCCGCTCCGACATCATCTCCGGTCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGTTTGCAAACTTGCCTCCTATTCTTGGATTATATTCCAGTTTTGTGCCTCCACTGATATATTCCCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGCGAGACGGTTTCCTTTAGTCAAGATCCAATTCTCTATCTTAAGTTGGCTTTCACTGCCACTTTTTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACACTGGTGGGTTTTATGGCTGGTGCAGCGATTATTGTATCACTGCAACAGCTGAAAGGGTTGCTTGGAATAGTTCATTTCACCAACAAGATGCAAATAACACCTGTACTGATTTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAAACCTTTTGTTGGGATTCAGTTTCCTACTATTCCTGTTAACAACAAGGCACATTAGCTTGAAGAAGCCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTTGTATTTATTCTGAGAAATACGACACATAAAATTGCTATTATTGGTGAATTGCCAAAGGGACTTAATCCCCCATCATCAAATATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTATCAAAACAGGACTTGTCACTGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCCCGATCAGCTGTTAACTACAATGCCGGGGCACAGACTGCAGTCTCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCACTGTTCTATTACACGCCAAATGTAGTATTAGCAGCCATTATCATCACTGCTGTTGTAGGGCTAATAGATTATCAAGGTGCATATAAGTTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTTGGTTCATTTCAGTGCCTTTAGGCCTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACGCCAATATTCCACAGCCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTGTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTACAAGAAAGGATACTGAGATGGGTTAGAGAAGAGGAAGAGCGAGTAAAAGCAAATAATGAAAGTACATTGAAGTGCATAATTTTGGACATGACAGCTGTTACAGCCATAGACACAAGTGGAATCGATACTCTATATGAACTCAGAAAGGTACTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTCTATCTCTCAGTAGGAGAAGCTGTGGCTGACATTTCATCTTCCTGGAAAGCTCAGCCTTGA 1992 0.4212 MGVNSYSNSRVEHLACNNNGSNNNMKIQAEIQMPPLEIHKVRLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCLMKLLLALQYFFPIFQWAPHYNLSLLRSDIISGLTIASLAIPQGISYAKFANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSFSQDPILYLKLAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTIFVFILRNTTHKIAIIGELPKGLNPPSSNMLYFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQGAYKLWKVDKLDFLACLCSFFGVWFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHSLNQYREALRIPSFVILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLYELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLSVGEAVADISSSWKAQP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1721 663 TIGRFAM sulP: sulfate permease 88 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso8g1721 663 SUPERFAMILY SpoIIaa-like 537 654 IPR036513 -
Gso8g1721 663 CDD STAS_SulP_like_sulfate_transporter 533 648 - -
Gso8g1721 663 Pfam STAS domain 533 651 IPR002645 -
Gso8g1721 663 Pfam Sulfate permease family 101 480 IPR011547 GO:0016021
Gso8g1721 663 PANTHER SULFATE TRANSPORTER 24 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso8g1721 663 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Gso8g1721 663 ProSiteProfiles STAS domain profile. 532 655 IPR002645 -
Gso8g1721 663 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 663 - -
Gso8g1721 663 Gene3D STAS domain 512 657 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1721 Gso-Chr8 16795745 16800069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1721 6 663 Inorganic Solute Cotransporters AT3G15990 73.636 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1721 K17471 - gmx:100817604 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0129 15 1138935 1144388 Gso8g1721 8 16795745 16800069 PCT
Gso11g3675 11 52377192 52382386 Gso8g1721 8 16795745 16800069 PCT
Gso8g1721 8 16795745 16800069 Gso15g0129 15 1138935 1144388 PCT
Gso8g1721 8 16795745 16800069 Gso11g3675 11 52377192 52382386 PCT