Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1713 ATGGATTTCTGGCCAGAATATCTTGCAAGCGGTTCGGGAAGAGAGTTTGTAGCAGGTGGCTTTGGAGGCATTGCTGGTATAATTTCAGGTTATCCACTTGATACTCTTCGAATCAGATTACAAAACTCGAAAAATGGCTCTGCATTCACAATCCTTAGACAAATGGTGTCTAGGGAAGGACCAACTTCTTTGTACCGTGGCATGGGCGCACCATTAGCCTCCGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCAGTTCTGTCAAGGGTATTTGACTCATCTGTTTTTGCTAAAGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGAACGGGTGCCGGGGTTCTCCAAAGTCTATTAATATCCCCTGTGGAGTTGACCAAAGTTCAACTTCAGCTGCAAAACGGAGGCAAGATGACAGAATCTGTAAAAGGTTCTTTGACACTCGCCAAAAATATATGGAGAAAAGAAGGCCTCAGAGGAATCTATCGCGGACTTGGTCTCACAGTGATGAGGGATGGACCTTCTCATGGTTTATACTTCTGGACATACGAATACATGAGGGAACAGCTTCACCCAGGTTGCAGAAAAAGTGGTGAAGAGAGTTTGGATACCATGTTGATAGCAGGAGGATTAGCAGGGGTGACGAGTTGGATTAGTTGCTACCCTTTTGATGTTGTAAAGACAAGACTACAGGCTCAAACACCCTCTTCTATAAAGTACAAAGGCATTATAGATTGTTTCAAAAAGAGTGTTAACGCAGAAGGATACGGTGTGCTATGGCGGGGTTTAGGAACTACAGTTGCCAGAGCGTTCCTCGTAAATGCTGCCGTATTTTCTGCTTATGAGATTTCACTAAGATTATTGTTTAACAATGGGAGTATTCAAATGCAGGAAACACTATAG 912 0.4353 MDFWPEYLASGSGREFVAGGFGGIAGIISGYPLDTLRIRLQNSKNGSAFTILRQMVSREGPTSLYRGMGAPLASVTFQNAMVFQTYAVLSRVFDSSVFAKDPPSYKGVALGGTGAGVLQSLLISPVELTKVQLQLQNGGKMTESVKGSLTLAKNIWRKEGLRGIYRGLGLTVMRDGPSHGLYFWTYEYMREQLHPGCRKSGEESLDTMLIAGGLAGVTSWISCYPFDVVKTRLQAQTPSSIKYKGIIDCFKKSVNAEGYGVLWRGLGTTVARAFLVNAAVFSAYEISLRLLFNNGSIQMQETL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1713 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Gso8g1713 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
Gso8g1713 303 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Gso8g1713 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Gso8g1713 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Gso8g1713 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Gso8g1713 303 Gene3D Mitochondrial carrier domain 9 300 IPR023395 -
Gso8g1713 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Gso8g1713 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Gso8g1713 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Gso8g1713 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Gso8g1713 303 Pfam Mitochondrial carrier protein 13 93 IPR018108 -
Gso8g1713 303 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
Gso8g1713 303 Pfam Mitochondrial carrier protein 109 193 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1713 Gso-Chr8 16727575 16731815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1713 1 294 Antiporters AT1G79900 68.475 6.46e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1713 K15109 - gmx:100791536 589.341