Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1704 ATGGGAGTCAACATGTCCAACACGCCACCTCACACCAAAGACTTGTTTTCCTCTCCAGTTCTCTCTCTTAGCTTAGCTGGGATTTTCCGGTATGCTGGGGAGGCGGCGGAGACGTCCGGCATGGAGATGGCCGGCGATGAGGTCCGGCAAGAGGATACTGCTGATATTAGCAGCGACAACTCAGGACCCGTGAGATCCAGGTCAGAAGAAGATTTTGATTGTGATGATGTTCATGATGGTGATGACAAAGATAACAATGATAAGAATAGAAAGAAGAAGAGAAAGTATCACAGGCACACCACTGAACAGATAAGAGAAATGGAAGCGCTTTTCAAGGAATCACCGCATCCTGATGAAAAGCAGAGGCAAAAACTCAGCCAGCAACTTGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCACTACAAGAGCGCCATGAAAACTCATTGTTGAAGACAGAATTAGACAAACTTAGGGAGGAAACTAAGGCCATGCGAGAAACCATAAACAAATCTTGTTGCCCCAATTGTGGCATGGTAACGGCTACCATAGATGCTTCCATGTCCACTGAAGAAAAACAACTTCTTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTCCGAACAGCTTTAGGGAAATTCTCACCAAGGACAACGTCTCCTACTACATCTTCTGCTGGCCATGATGAGGAAGAGAATAGAAACTCTTTGGGTTTTTACAGTGTACTTTTCGGGCTCGACAAATCAAGGATAATGGATGTAGCAAACCGAGCAACGGAGGAGCTCATAAAGATGGCAACTATGGGGGAACCATTATGGGTTCGTAGCGTTGAAACAGGTCGCGAAATACTTAACTACGATGAATATGTGAAGGAGATGGCAGCTGAAAATTCGGGCAGTGAAAGGCCAAAGACATTCATCGAAGCCTCAAGAGAAACTGAGGTTGTTTTTATGGATCTTCCTCGGCTTCTCCAAAGTTTTCTAGACGTGAATCAATGGAAGGAAATGTTTCCGTGCTTAATATCAAAGGCTGTAACTGTTGATGTTATAAGCAATGGCGAAGGTTCTAACAGGAATGGTGCAGTGCAATTGATGTTTGCTGAGCTTCAAATGCTCACTCCTATGGTGCCCACCCGAGAAGTGTATTTTGTGAGGTGCTGCAAACAGTTGAGTGATGAACAGTGGGCAATAGTTGATGTCTCCATAGACAAAGTAGAAGACAACATTGATGCATCCCTTGTGAAATGTAGAAAACGCCCGTCTGGGTGTATTATTGAGGATAAGTCAAATGGCCATTGCAAGGTGATATGGGTGGAGCACTTGGAGTGCCAAAAGAGCACAATTCATACAATGTACCGAACTATTGTCAACAGTGGTCTAGCTTTTGGGGCAAGGCATTGGATAGCAACACTACAACTTCATTGTGAACGTTTGGTTTTCTACATGGCAACGAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACGTTGGCTGGGAGGAAGAGCATTTTGAAGTTGGCACAAAGGATGACGTGGAGTTTCTGCCATGCAATTGGTGCATCAAGTTTTCATACATGGACCATGGTCACAAGTAAAACAGGAGAAGACATAAGGATTAGCTCTAGGAAGAACTTGAATGACCCAGGTGAACCTCTTGGGGTTATCTTGTCTGCCGTTTCTTCTGTGTGGCTTCCTGTCTCTACTAATGTGCTGTTCGATTTCTTGAGGGATGAAGCTCGTCGAAGTGAGTGGGATATCATGTCCAGTGGTGGGTCAGTTCAGTCCGTTGCAAATTTAGCTAAAGGAAAAGACCGAGGCAACGTTGTAAACATTCAAAAAATACAATCAAAAGATAACAGTGTGTGGATCTTGCAAGATAGCTGCACAAGTGCTTATGAGTCAATGGTGGTATATGCTCCTGTGGAATTTGCTGGTATACAAAGTGTGCTTACAGGATGTGATTCAAGTAATCTTGCTATATTGCCGTCAGGATTCTCAATTCTACCTGATGGGATTGAGGGAAGGCCATTGGTGATTTCGTCAAGGCAAGAAGAAAAATACACTGAAGGAGGCTCTTTGTTTACAATGGCATTCCAGATTCTTGTCAACCCTTCTCCAACAGCCAAGTTAACAACGGAGTCTGTGGAATCGGTCAATAATCTTGTGTCTTGTACATTGAGAAATATTAAAACAAGTTTGCAGTGTGAAGATGGTTAG 2247 0.4388 MGVNMSNTPPHTKDLFSSPVLSLSLAGIFRYAGEAAETSGMEMAGDEVRQEDTADISSDNSGPVRSRSEEDFDCDDVHDGDDKDNNDKNRKKKRKYHRHTTEQIREMEALFKESPHPDEKQRQKLSQQLGLAPRQVKFWFQNRRTQIKALQERHENSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVEKLRTALGKFSPRTTSPTTSSAGHDEEENRNSLGFYSVLFGLDKSRIMDVANRATEELIKMATMGEPLWVRSVETGREILNYDEYVKEMAAENSGSERPKTFIEASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAVTVDVISNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTMVTSKTGEDIRISSRKNLNDPGEPLGVILSAVSSVWLPVSTNVLFDFLRDEARRSEWDIMSSGGSVQSVANLAKGKDRGNVVNIQKIQSKDNSVWILQDSCTSAYESMVVYAPVEFAGIQSVLTGCDSSNLAILPSGFSILPDGIEGRPLVISSRQEEKYTEGGSLFTMAFQILVNPSPTAKLTTESVESVNNLVSCTLRNIKTSLQCEDG* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1704 748 Coils Coil 149 176 - -
Gso8g1704 748 MobiDBLite consensus disorder prediction 40 103 - -
Gso8g1704 748 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Gso8g1704 748 SMART START_1 263 487 IPR002913 GO:0008289
Gso8g1704 748 MobiDBLite consensus disorder prediction 221 242 - -
Gso8g1704 748 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 17 745 IPR042160 -
Gso8g1704 748 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Gso8g1704 748 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 17 745 - -
Gso8g1704 748 CDD START_ArGLABRA2_like 258 486 - -
Gso8g1704 748 SUPERFAMILY Homeodomain-like 80 151 IPR009057 -
Gso8g1704 748 ProSiteProfiles START domain profile. 254 490 IPR002913 GO:0008289
Gso8g1704 748 Coils Coil 200 220 - -
Gso8g1704 748 Pfam START domain 264 487 IPR002913 GO:0008289
Gso8g1704 748 SUPERFAMILY Bet v1-like 517 737 - -
Gso8g1704 748 SMART HOX_1 92 154 IPR001356 GO:0003677
Gso8g1704 748 Gene3D - 319 485 IPR023393 -
Gso8g1704 748 CDD homeodomain 97 148 IPR001356 GO:0003677
Gso8g1704 748 MobiDBLite consensus disorder prediction 64 89 - -
Gso8g1704 748 Pfam Homeodomain 93 148 IPR001356 GO:0003677
Gso8g1704 748 Gene3D - 78 162 - -
Gso8g1704 748 SUPERFAMILY Bet v1-like 256 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1704 Gso-Chr8 16666302 16672639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1704 56 747 Homeobox Transcription Factor Family AT1G79840 64.154 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso8g1704 START 6.1e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1704 K09338 - gmx:100789432 1422.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0166 7 1554518 1560306 Gso8g1704 8 16666302 16672639 GST