Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1689 ATGCATGGCTTATCAGAGGCTCCATCCATGGAGAAAAGCTGTGATAAGATATCCTCTTCAGTTTCCTCCAATCTTTCTTCTGAGGATGAGAACACTACTTCATCTCTGAACTTCAAGGAGACAGAGCTGAGGCTTGGCCTGCCAGGTTGTGATTCTCCTGAGAACAACAACAAATCAGGGGTCTCTCTTTTTGGCAAGGATTTGCAGAAGAAGAATAATGGCTATTCTTCTGCTTCTTCAACTCCTTCCAACAAGAACCTCAAGAGGGGCTTCCCTGATGCCATTAGCTCTTCTTCTTCCTCTTCTGGGAAATGGATTTTCTCGGCGAGTGATGCAGCAACTGAAGCTGATTTGGAAAGTGGTTCTAATATCTCTGGAGGATGCAACAAAGAGGTTGGAATGGTTCCTCACTATGAGAAACCAGCTCAAGTTGCTGCAACAAATGAACATGCTCCTGCTCCTGCTCCAAAAGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTTCGAAAGAACACGATGATGGCTTATAATTTGGCAAAATGTGACAACGAAGCTGAGGAGAAATCAGGAGTAGGTTGTCTTTACGTTAAGGTCAGCATGGATGGTGCTCCATATCTCAGAAAGGTTGATCTGAAAACCTACAGCAACTATATTGAACTTTCTTCAGCTCTTGAGAAAATGTTCAGCTGCTTTACCATTGGTCAATGCAATTCTCGTGCACTTCCTGGGAAAGATGGATTAAGTGAGAGTGCATTCAGGGATCTTGTTGATGGCTCTGAATATGTTCTTACATATGAAGATAAGGAAGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGAAAATGTTCACTGAGTCATGTAAGAAACTAAGGATAATGAAAGGCTCTGAGGCAATCGGGCTAGCTCCAAGGGGTATGGAAAAATTTAGGAGCCAATACTAG 945 0.436 MHGLSEAPSMEKSCDKISSSVSSNLSSEDENTTSSLNFKETELRLGLPGCDSPENNNKSGVSLFGKDLQKKNNGYSSASSTPSNKNLKRGFPDAISSSSSSSGKWIFSASDAATEADLESGSNISGGCNKEVGMVPHYEKPAQVAATNEHAPAPAPKAQVVGWPPIRSFRKNTMMAYNLAKCDNEAEEKSGVGCLYVKVSMDGAPYLRKVDLKTYSNYIELSSALEKMFSCFTIGQCNSRALPGKDGLSESAFRDLVDGSEYVLTYEDKEGDWMLVGDVPWKMFTESCKKLRIMKGSEAIGLAPRGMEKFRSQY* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1689 314 Gene3D - 188 307 - -
Gso8g1689 314 MobiDBLite consensus disorder prediction 69 103 - -
Gso8g1689 314 MobiDBLite consensus disorder prediction 12 40 - -
Gso8g1689 314 PANTHER AUXIN-RESPONSIVE PROTEIN 10 305 - -
Gso8g1689 314 SUPERFAMILY CAD & PB1 domains 194 295 - -
Gso8g1689 314 ProSiteProfiles PB1 domain profile. 194 296 IPR000270 GO:0005515
Gso8g1689 314 MobiDBLite consensus disorder prediction 1 103 - -
Gso8g1689 314 Pfam AUX/IAA family 40 305 IPR033389 -
Gso8g1689 314 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 305 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1689 Gso-Chr8 16545904 16549033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1689 196 312 B3 DNA Binding Superfamily AT1G30330 30.769 8.05e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso8g1689 AUX_IAA 6.2e-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1689 K14484 - gmx:100804782 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0152 7 1449047 1452204 Gso8g1689 8 16545904 16549033 GST