Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1675 ATGCCGGTACTGCGTAGCGGAGCGCGCAAGGGCCGGGCAGCACCCAAACAGCAACAACAGAAACAGCAGCAGAGTCCTGTGGTGGAAGGGGAGGCTATTGCGACGAGGACGCGTCGGCGGCGTGCGGCGGCGGCTGCAGCAGCGGCAGTGCCGGAGAGTAACAACAACAACAACAATACCAATAACCAGCAGCAACAGGTGGAGCAGGTGGCAGTGGTAAATGAGAACGTAGCTGTTGCGGCGAGGGAAGAAGATAATCGAGTCGCGGAGGAGGAAGGTGTTGTTAGGGGTGGTGGAGCGGAGAGGGAAGAGGTTGCGGAGAAAAAGATGGGTGGGTGTGACAGTGGGGGACGGAGCAATGGTAAGGCCAATGCAGCTGGTGAAGATGACGCCAATACCCCTCAGGTTCCTCAGAAGATTCAAGTAGGTAATTCTCCTTCCTATAAAGTAGAAAAAAAACTTGGCAAGGGTGGATTTGGTCAAGTATACGTCGGGCGACGTACTGGTGGAAATTTGAATGAAAGAACTGGACCTGGAGCTGTAGAGGTTGCATTAAAACTCGAGCATAGAACTAGTAAAGGATGTACCTATGGACCACCCTATGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCACGGTGTACCTCAAGTACACTACAAGGGCAGGCAGGGTGACTATTATGTCATGGTTATGGATATGCTGGGACCTAGCCTCTGGGACGTTTGGAATAATAGCAATCATCACATGACCACCGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTGCTCCTGGGACACCTGATGAGAAAAAATTGTTCCTTGTAGATCTGGGATTAGCTACTAAGTGGAGGGATAGTACAACAGGCTCGCATGTGGAATATGACCAAAGGCCTGATGTTTTCAGGGGCACAGTCCGCTATGCTAGTGTGCATGCACATTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACACTGATTTTTCTTCTTCGAGGTCGCCTTCCATGGCAGGGGTTCCAGGGAGAAAACAAAGGATTTCTGGTTTGCAAGAAGAAAATGGGAACATCTCCTGAGACCCTATGCTGCTTTAGTCCCCTCCCTTTTAAGCAGTTTGTTGAACATGTTGTAAACTTAAAGTTTGATGAAGAGCCTAATTATGCAAAATACATTTCTCTATTTGATGGGGTTGTGGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGGGCACAAAAGCTCATTGGTCACAAGAGAGGTCGGTTGGTGATGGAAGAAGAGGATGATGAACAGCCCAAAAAGAAGATTCGTATTGGTTTGCCAGCATCCCAGTGGATAAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATACAAGGCTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTTGCTTCTTGTCAGAACCTATGGGCGTTAATCATGGATGCAGGGACAGGTTTCACTGCTCAAGTTTATGAACTCTCACCCTTCTTTCTCCATAAGGAATGGATCATGGAGCACTGGGAAAAAAATTACTATATCAGCGCAATTGCTGGAGCTGTAAACGGTAGCTCGCTAGTAGTAATGTCTAAGGGCACACAGTATTTGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTTAAGTGGATTAACAAAAAGTGGAGGGAGGGCTTTTACGTGACTGCAATGGCCACCTCAGGGTCAAGATGGGGAGTTGTCATGTCTCGTGGTGCGGGATTTTCGGATCAGGTGGTTGAACTAGATTTTCTATATCCTAGTGAGGGGATTCACAAGCGTTGGGACTGCGGATATCGAATCACAGCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTGAGTGTGCCAAGAAGGAAGCCTTTGGATGAAACTCAGGAAACGCTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGGAGAAGTGGGCAAAGAACCTCTACATTGCTTCCATTTGCTACGGACGCACAGTTTCTTGA 2136 0.47 MPVLRSGARKGRAAPKQQQQKQQQSPVVEGEAIATRTRRRRAAAAAAAAVPESNNNNNNTNNQQQQVEQVAVVNENVAVAAREEDNRVAEEEGVVRGGGAEREEVAEKKMGGCDSGGRSNGKANAAGEDDANTPQVPQKIQVGNSPSYKVEKKLGKGGFGQVYVGRRTGGNLNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNSNHHMTTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGAPGTPDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPETLCCFSPLPFKQFVEHVVNLKFDEEPNYAKYISLFDGVVGPNPDIRPINTEGAQKLIGHKRGRLVMEEEDDEQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDTRLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTAQVYELSPFFLHKEWIMEHWEKNYYISAIAGAVNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATSGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1675 711 MobiDBLite consensus disorder prediction 1 67 - -
Gso8g1675 711 ProSiteProfiles Protein kinase domain profile. 148 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1675 711 ProSitePatterns Protein kinases ATP-binding region signature. 154 186 IPR017441 GO:0005524
Gso8g1675 711 SMART serkin_6 148 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1675 711 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 100 685 - -
Gso8g1675 711 MobiDBLite consensus disorder prediction 50 67 - -
Gso8g1675 711 SUPERFAMILY Protein kinase-like (PK-like) 147 427 IPR011009 -
Gso8g1675 711 CDD STKc_CK1 148 423 - -
Gso8g1675 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Gso8g1675 711 Gene3D Transferase(Phosphotransferase) domain 1 113 466 - -
Gso8g1675 711 MobiDBLite consensus disorder prediction 13 30 - -
Gso8g1675 711 PANTHER CASEIN KINASE-RELATED 100 685 - -
Gso8g1675 711 Pfam Protein kinase domain 148 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1675 711 MobiDBLite consensus disorder prediction 84 111 - -
Gso8g1675 711 MobiDBLite consensus disorder prediction 84 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1675 Gso-Chr8 16410204 16416132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1675 113 372 AGC Kinase Gene Family AT3G08720 22.053 1.54e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso8g1675 Pkinase 2.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1675 - - gmx:100799630 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0137 7 1297436 1303296 Gso8g1675 8 16410204 16416132 GST