Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1667 ATGATGCTTCTGTTGCAAAAACCCCATTGGGGGTTGCTTCTTCTCTTTCTCCTCTTTCAGCTTCACAGCAGCACCTGCTACCCCACAGAACCCATGAACTGTACGGACACAAGCCGTGTTTGCACTTCTTTCATGGCCTTCAAGCCTGGACCGAACCACACACTTGCTCTGATTCAAAGCATGTTTGATGTTTTGCCTGGTGACATCACAGTTGAAGGCACCGGTTGGGGTTACATGTTCATAAGGAAGAACTGTTCTTGTGCTGCTGGCATAAAAAATTACGTGTCCAACACCACTTTCACTGTGAAATCCAATGAGGGGTTGCTGTATGACATGGTGATGGATGCCTATGATGGCCTAGCTTTCCTTCCCAACACAACCAGGATGGCCAGGAATGGTGCTGTTGTGTCACTGACGTTGTTTTGTGGCTGTTCCAGTGGATTATGGAACTATTTGGTCAGTTATGTGATGAGAGATGGAGATAGTGTTGAGTCCTTGGCAAGCAGGTTTGGGGTTAGTATGGATAGCATTGAGAGTGTGAATGGCATTGGTAATCCTGATAATGTCACTGTTGGTTCACTTTATTATATACCCCTTGATTCTGTTCCTGGTGATCCTTATCCCCTAAATAATGCTGCTCCACCAGTTCCTGTTCCTTCCCCATCCTTCGATAATTTTTCAGCTGATCAAGTCAATCATAAGGCTCATGTACCCTATGGATGGATCGTTGGGGGTTTAGGAGTTGCGCTTGTTCTAATAATATTAACTGTTATTCTTTGTGTTTGTCTGAGATCATCAAATTGTTTTGCTGATACCAGAACTCATGAGAAAGATGCTGAGGGTAAGGTCTCTCATAAATTCCATATTCTTCGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAACATGTTGATAAGAAGCAAACAGATGGTGAATCCAGCAATCACACAATTACCATTCCCAAAGCTTCAACTCTTGGGCCTGACGTATTTGACATGGATAAGCCTGTTGTTTTTACATATGAAGAGATTTTCTCCACAACTGATGGTTTCTCAGATACAAGTCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTCCGTGATCAGGAAGTTGCTATTAAAAGAATGACAGCTACTAAAACAAAAGAGTTTATGTCTGAGATGAAAGTTTTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTGGTATATGAATATGCTCAGAAGGGTTCACTCAAAAGCCATTTGCATGATCCTCAAAATAAGGGCCACTCCCCACTTTCTTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGACTTGAATACATACATGAGCACACAAAAACTCATTATGTTCACCGTGATATCAAGACAAGTAACATTTTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGAAAAGCAAATGAGGGAGAAATTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATATTTGAGTGATGGTCTTGCGACCACTAAAAGTGATGTCTATGCATTTGGTGTTGTCCTTTTTGAGATCATATCAGGAAAAGATGCCATCATTCGATCTGAAGGCACAATGTCAAAAAATCCTGATAGACGTTCACTGGCATCCATAATGCTGGGAGTTCTTAGGAATTCACCTGATTCTATGAGCATGTCAAGCTTGAGAGAATATATTGATCCAAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGTTGGCCATGTTGGCAAAGCAATGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATATCCCTTTCACAGATTCTGCTATCTTCAGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 1998 0.4184 MMLLLQKPHWGLLLLFLLFQLHSSTCYPTEPMNCTDTSRVCTSFMAFKPGPNHTLALIQSMFDVLPGDITVEGTGWGYMFIRKNCSCAAGIKNYVSNTTFTVKSNEGLLYDMVMDAYDGLAFLPNTTRMARNGAVVSLTLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIESVNGIGNPDNVTVGSLYYIPLDSVPGDPYPLNNAAPPVPVPSPSFDNFSADQVNHKAHVPYGWIVGGLGVALVLIILTVILCVCLRSSNCFADTRTHEKDAEGKVSHKFHILRNPSFFCGSGRYICGKHVDKKQTDGESSNHTITIPKASTLGPDVFDMDKPVVFTYEEIFSTTDGFSDTSLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGSLKSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKDAIIRSEGTMSKNPDRRSLASIMLGVLRNSPDSMSMSSLREYIDPNMMDLYPHDCVFKLAMLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1667 665 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Gso8g1667 665 Gene3D Transferase(Phosphotransferase) domain 1 428 652 - -
Gso8g1667 665 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Gso8g1667 665 Gene3D LysM domain 150 203 IPR036779 -
Gso8g1667 665 SUPERFAMILY Protein kinase-like (PK-like) 334 637 IPR011009 -
Gso8g1667 665 SMART serkin_6 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1667 665 Pfam Protein tyrosine and serine/threonine kinase 360 635 IPR001245 GO:0004672|GO:0006468
Gso8g1667 665 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 665 IPR044812 GO:0019199|GO:0045087
Gso8g1667 665 Pfam LysM domain 155 192 IPR018392 -
Gso8g1667 665 SMART LysM_2 154 198 IPR018392 -
Gso8g1667 665 PANTHER BNAA06G02020D PROTEIN 32 665 - -
Gso8g1667 665 Gene3D Phosphorylase Kinase; domain 1 331 426 - -
Gso8g1667 665 CDD LysM 153 197 IPR018392 -
Gso8g1667 665 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1667 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Gso8g1667 665 SUPERFAMILY LysM domain 153 198 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1667 Gso-Chr8 16323027 16330143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1667 30 665 Receptor kinase-like Gene Family AT1G51940 69.565 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso8g1667 PK_Tyr_Ser-Thr 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1667 - - gmx:100796989 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0130 7 1220285 1227109 Gso8g1667 8 16323027 16330143 GST
Gso15g0182 15 1556297 1562304 Gso8g1667 8 16323027 16330143 PCT
Gso11g3630 11 51981228 51986574 Gso8g1667 8 16323027 16330143 PCT
Gso8g1667 8 16323027 16330143 Gso15g0182 15 1556297 1562304 PCT
Gso8g1667 8 16323027 16330143 Gso11g3630 11 51981228 51986574 PCT