Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1663 ATGGGGAAAGCTAGCAGGTGGTTGAAGGGGTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCACCACCTTCTTCAGTTCCTGCCACTGATAACAACAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCCGTGGCAGCCGCCACCGCTGCTGCTGCCGATGCCGCCGTGGCCGCCGCACAGGCGGCCGTGGCTGTTGTGAGGCTCACAAGCCAGGGGAGAGGGGCATTGTTCAGTGGAAGCAGGGAGAAATGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGTTCCATGAGCAAAGAAGACAGATTTCTACCTGAAGTTCTTGCAAGAAAACCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCGAGGTCTAGGCGCTTCACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGCCATGCAATCTCATCCCCTCTTCCTTGTCCGGTCCCCGGTCGAATCTCGGTTCCTGATTGCAGACACATTCAAGATTTTGATTGGTACTACAACGTGGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCGCGTTTCACAAACTATGTGAGGGCTAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACTTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAATGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGAATCCTGGAATTTTTTACAATCACAAGGAATATTTGAGAGGCAATTGGAGTCTAAATGA 1230 0.4724 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPPPSSVPATDNNNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKEDRFLPEVLARKPVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHIQDFDWYYNVDECRFSTAHSTPRFTNYVRANAPATPAKSVCGDTFFRPCSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEESWNFLQSQGIFERQLESK* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1663 409 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Gso8g1663 409 Pfam Protein of unknown function (DUF4005) 301 374 IPR025064 -
Gso8g1663 409 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 384 - -
Gso8g1663 409 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Gso8g1663 409 SMART iq_5 135 156 IPR000048 GO:0005515
Gso8g1663 409 SMART iq_5 112 134 IPR000048 GO:0005515
Gso8g1663 409 Gene3D - 56 138 - -
Gso8g1663 409 MobiDBLite consensus disorder prediction 1 53 - -
Gso8g1663 409 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Gso8g1663 409 MobiDBLite consensus disorder prediction 10 39 - -
Gso8g1663 409 Pfam IQ calmodulin-binding motif 140 154 IPR000048 GO:0005515
Gso8g1663 409 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1663 Gso-Chr8 16281073 16283445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1663 1 378 IQD Protein Family AT3G16490 54.847 1.04e-109 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1663 - - gmx:100782699 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0127 7 1177829 1180855 Gso8g1663 8 16281073 16283445 GST
Gso15g0187 15 1611563 1613664 Gso8g1663 8 16281073 16283445 PCT
Gso11g3626 11 51918012 51921036 Gso8g1663 8 16281073 16283445 PCT
Gso8g1663 8 16281073 16283445 Gso15g0187 15 1611563 1613664 PCT
Gso8g1663 8 16281073 16283445 Gso11g3626 11 51918012 51921036 PCT