Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1654 ATGCATATCCAAAGGAACAAAAATATTATTAAGATGATCAACATTATTGGAGCACTTGTTCTACTCTTTGCATTTCTCTTCCTCAGTTGTGTGTATGCACAAGACACAACAACCCTTGTGCCTGCAATCATAACTTTTGGTGATTCTGCTGTGGATGTAGGGAACAATGACTATCTTCCCACCCTTTTCAAGGCTGATTACCCTCCTTATGGGAGGGACTTTGTTAACCACCAACCTACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATTTCACTGCTGACACATTGGGTTTCAAGACCTATGCTCCAGCATATCTTAGCCCACATGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAATGCTGCTACTTTGAATCACGCGATTCCGTTGTCCCAACAGTTGAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATCATCAAGGATGCGTTGTATGTGCTCAGTGCTGGAAGCAGTGACTTTGTGCAAAATTATTATGTCAATCCTTGGATCAACAAAGTCTACACTCCTGATCAGTATTCGTCCTACTTAATTGGTTCATTCTCAAGTTTTGTTAAGGACTTGTATGGATTGGGAGGCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTATATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCTCAAGGATTTAACAAGAAGCTCAACTCAGCTGCAACGAGTCTTCAAAAGCAACTTCCTGGTCTTAAGATTGCGGTTTTCGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCTGGTTTTGTGGAGGCAAACAGAGGATGCTGTGGTACCGGGACTGTAGAGACAACATCCTTGTTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACACAGTATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATGCATTAATTCTACAAGGCATATCTCTTGTCACATAA 1098 0.4262 MHIQRNKNIIKMINIIGALVLLFAFLFLSCVYAQDTTTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPHASGKNLLIGANFASAASGYDENAATLNHAIPLSQQLSYFKEYQGKLAKVAGSKKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYSSYLIGSFSSFVKDLYGLGGRRLGVTSLPPLGCLPAARTIFGFHENGCVSRINTDAQGFNKKLNSAATSLQKQLPGLKIAVFDIYKPLYDLVQSPSKSGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGISLVT* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1654 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
Gso8g1654 365 Gene3D SGNH hydrolase 32 360 IPR036514 -
Gso8g1654 365 SUPERFAMILY SGNH hydrolase 43 356 - -
Gso8g1654 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Gso8g1654 365 PANTHER GDSL ESTERASE/LIPASE EXL3 13 364 - -
Gso8g1654 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 364 - -
Gso8g1654 365 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1654 Gso-Chr8 16202439 16204861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1654 39 354 Acyl Lipid Metabolism Gene Families AT4G10950 32.075 1.09e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1654 - - gsj:114422362 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0122 7 1112089 1114358 Gso8g1654 8 16202439 16204861 GST
Gso11g3622 11 51889860 51891682 Gso8g1654 8 16202439 16204861 PCT
Gso8g1654 8 16202439 16204861 Gso11g3622 11 51889860 51891682 PCT