Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1653 ATGGAAAGAGAAACACGACGGATTGTCATCTTAAACGTATGGGCATGGCTTGCCTTGGTTTCACTTTTCACTATTCATACCAATTCAGCACTAGAAAATAACAACCCCGGTTTCATAAGCATTGATTGTGGATCAGAAGCAGCTTATTCCCACACCGAAACTGGAATTTGGTTTGAGACAGACAATGATTATGTTGGAACAGGAAGCAATCATATGGTTTCATCGAATGTGAACTTAAACTATCGCGATTATGGGAGACAGTTGAACACACTGAGATGCTTCCCAAAAGGAGAGAGGAACTGCTACACCCTGAAACCACAGCATGGTAAAAATAACAGTAGCAAGTATCTCATAAGGGCTTTCTTTTCATATGGAAACTATGATGGCAAAAATGAAGCTCCTTCTTTTGACATGTACATTGGAGTCAATCTTGTGGACAAAGTTAATCTCACTGATTACGCCGACACTTACTGGTTCACGGAGATTATTCAGACTGTGTCAAGTGAAAGCATAGATGTGTGCCTTGTTAAAAGTGGCCCCACAATCCCTTGCATTGCTTCATTGGAATTGAGACCTTTGAACACTTCCATTTATCACACTCCCACCGCTGCTCCACAACCACTATTATATCTTCAGCTAAGGATTGACGTTGGCTCCTCTGCATTGCCTCCACCTTATGGAGACTATTACTTTAGGTACAAAGATGACGTGTATGATCGGATATGGCGGTGTGACCTCGATGATACGAATGGTTGGTATCCCTTGGTTATGGAATCTCTTAACTTGGACAGTGGAAGAAGAAGCAGTGATATTTATAAGTTGCCCTCCCAAGTACTAAGAACTGCAGTCCAATCTCCAAACGTCTCGCACCCTTTACAATTTGACTATGACAATCTTTATGCGCCCCTGGACAAACCTTATGAGTACTACGTCTACTTTCACTTTCTTGAAATTCAGCAACTTCCCATTGGTAAAAAAAGAATCATTAATATCACCCTTAACTACCAAACCATTCTCACACAACCTTTGGTTCTTGAATACCTCAAGCCTGTCACCATTGCGCCTCAAAAAACAAGTTCTGGTTCTGTCTTGTTCAATGTTAGTGCCACGTCAGAATCGGATGCTCCACCTATCCTCAACGCCTTCGAGGTCTATAAGTTGATAACACAACTTGATTTGCCCACACAGGCTAGAGATGTTGGTGCTATTGTGGACATCAAAAGTGCGTACCAGATCTCTAGATTGAATTGGCAAGGAGACCCATGTGTTCCAAAGCAATATGCATGGGATGGTCTCATTTGCAGCTCCTACAACACCGTTCCAAGAATCACATCTTTGAACCTGAGCTCAAGCAATCTGAAGGGGCAGATAAATATGTCATTCTCATACCTTACCGAACTAGAAATCCTGGATTTGTCACAAAACGAACTGGAAGGATCTTTACCAGAATTTCTGGCACAATTGCCAAAGTTAAAAATTCTTAATGTGACAGGGAACAAGCTTTCGGGTCCAATTCCTAAGGCTCTCAAGGAAAAGGCAGATTTGCAATTAAGTGTTGAGGGAAATCCATATCTTTGCACCTCTAGTACGTGCCGCAAGAGAAAGAAGGTAGTAATTCCGTTGGTAGTAACATTTGTGGGAGCCTTCATCATTCTTTCGATAGTATCACTTTCTTTTTTAAGAAGACGACGACTACAAGGTGTCATGGGTACGAAGAAGCTGAGTTGTTTCAACAAAATTGAGTATGTGAACTCAAATAAACAAGAATTCACCTACGCAGAGGTTCTAAGCATCACCAATAACTTTGAGAAGGTTGTGGGTAAAGGAGCATATGGAACTGTCTACTATGGTTTCAAAGGTGAAACACAAGTAGCAGTGAAGATTCTCTCTCCCTCAACTCAAGGTTTTCAGCAATTTCAGACAGAGGCAAAAATTCTCACTAGAGTACACCATACATGCTTGACTCCTCTAATTGGATATTGCAATGAAGCCACGGCGCTCATATATAAATACATGGCCTACGGAGACTTGGCAAACCATCTTTCAGATAAAAACCAAATTTTGCTAAGTTGGAAACAGAGACTTCAAATTGCTCTGGATTCAGCAACAGGGTTGGAGTATCTGCATAAATATTGTAAGCCTCCAATTGTGCACAGAGATGTCAAGACTAGCAACATTTTACTTGACGAAGATTTCCACGCTAAAGTTTCTGATTTTGGGTTGTCAAAGATCTTTTCAAATGAATGTGACACCCATGTACTAACAAAAATCGCAGGCACCCCGGGATACATGGACCCTGAATATCAAATAACAAACAAGTTGACTGAAAAAAGTGACGTCTATAGTTTTGGAATTGTTCTATTAGAGATTATCACAGGGCACCCTGCTATCTTGAAAACCCACGAGAATACTCACATAGTTCAGTGGGTAAATTCCATGTTAGCTGATGAAGGAGAAATTGATAGTATTATGGATCCAAGGTTACAGGGAATATATGACTCTGAGACTGCATCGCAAGTTGTACATGTTGCAATGGCTTGTCTAGCTCCGAGTTCTATTAAGAGGCCAACAATGGATCAAGTGGTCAAAGAATTAAAACAATGTTTTCCCATGGAGAATATTGATGATAGTATATGTATATTCACTGAATTCTCTGTGGCATCAATTAGCGGAGAGAGTTCTCTAGCGAGGTAG 2694 0.4079 MERETRRIVILNVWAWLALVSLFTIHTNSALENNNPGFISIDCGSEAAYSHTETGIWFETDNDYVGTGSNHMVSSNVNLNYRDYGRQLNTLRCFPKGERNCYTLKPQHGKNNSSKYLIRAFFSYGNYDGKNEAPSFDMYIGVNLVDKVNLTDYADTYWFTEIIQTVSSESIDVCLVKSGPTIPCIASLELRPLNTSIYHTPTAAPQPLLYLQLRIDVGSSALPPPYGDYYFRYKDDVYDRIWRCDLDDTNGWYPLVMESLNLDSGRRSSDIYKLPSQVLRTAVQSPNVSHPLQFDYDNLYAPLDKPYEYYVYFHFLEIQQLPIGKKRIINITLNYQTILTQPLVLEYLKPVTIAPQKTSSGSVLFNVSATSESDAPPILNAFEVYKLITQLDLPTQARDVGAIVDIKSAYQISRLNWQGDPCVPKQYAWDGLICSSYNTVPRITSLNLSSSNLKGQINMSFSYLTELEILDLSQNELEGSLPEFLAQLPKLKILNVTGNKLSGPIPKALKEKADLQLSVEGNPYLCTSSTCRKRKKVVIPLVVTFVGAFIILSIVSLSFLRRRRLQGVMGTKKLSCFNKIEYVNSNKQEFTYAEVLSITNNFEKVVGKGAYGTVYYGFKGETQVAVKILSPSTQGFQQFQTEAKILTRVHHTCLTPLIGYCNEATALIYKYMAYGDLANHLSDKNQILLSWKQRLQIALDSATGLEYLHKYCKPPIVHRDVKTSNILLDEDFHAKVSDFGLSKIFSNECDTHVLTKIAGTPGYMDPEYQITNKLTEKSDVYSFGIVLLEIITGHPAILKTHENTHIVQWVNSMLADEGEIDSIMDPRLQGIYDSETASQVVHVAMACLAPSSIKRPTMDQVVKELKQCFPMENIDDSICIFTEFSVASISGESSLAR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1653 897 PANTHER OS07G0107800 PROTEIN-RELATED 25 864 - -
Gso8g1653 897 ProSiteProfiles Protein kinase domain profile. 600 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1653 897 SUPERFAMILY L domain-like 427 512 - -
Gso8g1653 897 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 25 864 - -
Gso8g1653 897 Pfam Protein tyrosine and serine/threonine kinase 602 865 IPR001245 GO:0004672|GO:0006468
Gso8g1653 897 Gene3D Phosphorylase Kinase; domain 1 587 671 - -
Gso8g1653 897 Gene3D Ribonuclease Inhibitor 402 528 IPR032675 -
Gso8g1653 897 Pfam Malectin-like domain 41 386 IPR024788 -
Gso8g1653 897 SMART serkin_6 600 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1653 897 ProSitePatterns Protein kinases ATP-binding region signature. 606 627 IPR017441 GO:0005524
Gso8g1653 897 Gene3D Transferase(Phosphotransferase) domain 1 672 880 - -
Gso8g1653 897 SUPERFAMILY Protein kinase-like (PK-like) 582 865 IPR011009 -
Gso8g1653 897 CDD STKc_IRAK 606 867 - -
Gso8g1653 897 Pfam Leucine rich repeat 441 501 IPR001611 GO:0005515
Gso8g1653 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1653 Gso-Chr8 16186575 16196058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1653 19 873 Receptor kinase-like Gene Family AT1G51850 42.295 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g1653 Malectin_like 2.6e-79 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1653 - - gmx:100781084 1812.73