Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1648 ATGATGGGAATGTTATTGCAGTTTCTTTATGTATTGTTTGGGGTACTTATTTCTGTGGTTCTGGTTCAAGCACAGGATCAATCAGGATTCATTAGCATTGATTGTGGTCTACCTGAATCCTCAAGCTATACTGAGAAGACCACAAGCATATTTTACATTTCAGATGCCAAATTTATAGATGCTGGTGTAAGCAAGAGTATTTCACCAGCAGAGAAGAGTACTCATCTACAACAGCTAGCATATGTGAGGAGTTTTCCTAGTGGAGAGAGAAACTGTTACAGAATAAATGTAACCAGTGGTACTAAATATTTGATCAGAGCTACTTTCTTTTATGGAAACTATGATGGCCTCAATCAGCCACCACAATTTGATCTTCATCTTGGACCTAATTTATGGGACACAGTGAGCTTCCCCAATGCATCACTCAGCGAAATCAGTGAAATCATTTACACCCCATCACTAGATTACATACATCCATGTCTTGTTAACAAAGGTCAAGGGGCTCCATTCATTTCAACCATAGAATTGAGGACTTTGAAAAATGCTTCCTATGTCACAGCGTCAGCTGAATCATTGGCATACTATCGGCGATATGATTTAGGTTCCATCACCAACTTAGTATACAGGTACAACTATGATGTTTATGACCGCATCTGGGTGCCACATGGATTCAACCAGTGGACACAATTAAGCAGCACACTTAATCATGATATATTCCAGAATGATTACAAATTACCAGAAGTTGTCATGAGCACTGCTGCTACACCAATAAATGCTAGTGCTCCATTTCAGTTCTATTGGGATCCAGATAATGTGAATGAGAAATTCTACATCTACATGCACTTTAACGAGGTTAAAATTCTGGCAGAAAATGAAACTAGAACATTCAATATCTTCATGAATGGCAAGTTATTCTATGGACCTCTGACTCCTGGATATCTGACGAAAAATATCATATATAGTACATCAGCTTTGACCGGAGCTACAAGGTATCTATTTTCTCTTGCTAAGACAGGGACTTCTACCCTTCCACCCATCATGAATGCCATGGAGATTTATAAAGTAATAGATTTTGCTCAATCAGAAACTGAACAAGATGATGTTGATGCTATCACAAACATCAAAAACGCTTATGGGGTGGATAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCATACATTTGGGAAGGTCTAAATTGTAGTTATGATAACACCCCAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGACAGATATTATCTTTCATCTCCGAGCTCACTATGTTACAGTATTTGGATTTATCAAACAATAGTTTAAGCGGGTCAGTACCTGATTTTCTGACACAACTGCAATCACTTAAAGTCTTAAACTTGGCGAAAAACAACCTTACTGGTCCAGTTCCCGGAGGACTTGTTGAAAGATCAAAGCAAGGTTCACTATCATTGAGCCTGGATCAAAATCCAAATCTATGTGAATCTGATCCATGCATCCAGCAGACAAATAACAAGCAGCCAGATGGTGATCAACAGAAGAACAAAAATAATATAGTTATCCCGGTAGTAGCATCAGTTGCTGGGGTTTTGGTGCTCCTAATAATTGTAGCAGCAGCTATAATCTGTGGCCTTAAAAGGAAAAAACCACAAGCATCTGATGTAAACATTTATGTTGAGACGAACACTCCAAATGGATCACAATTTGCATCCAAGCAACGGCAATATACATTCAATGAGCTTGTTAAGATCACCAACAACTTTACCAGAATTCTTGGTAGAGGTGGATTTGGAAAAGTTTATCATGGATTTATTGATGACACTCAAGTAGCTGTAAAGATGCTTTCTCCGTCAGCAGTACGAGGATATGAACAATTCCTAGCAGAGGTTAAACTTCTGATGAGAGTTCATCATAGAAATCTGACTTCTCTTGTTGGGTATTGCAATGAAGAAAACAACATAGGGCTCATCTATGAATATATGGCAAATGGAAACTTGGATGAAATTGTTTCAGGAAAAAGTAGTAGGGCAAAGTTCTTGACATGGGAAGACAGACTCCAAATAGCATTGGATGCAGCCCAAGGACTGGAATATCTGCATAACGGTTGTAAGCCACCAATAATCCACAGAGATGTGAAATGTGCAAATATTTTATTAAATGAAAACTTCCAAGCAAAATTGGCTGATTTTGGGCTATCCAAAAGCTTTCCCACAGATGGGGGATCTTATATGTCCACTGTTGTTGCTGGAACTCCCGGTTATTTGGATCCCGAGTACAGCATATCAAGCAGATTGACAGAGAAAAGTGATGTTTACAGCTTCGGAGTTGTTCTTTTGGAGATGGTCACAGGTCAGCCAGCTATTGCAAAAACACCTGATAAGACTCACATAAGTCAGTGGGTTAAATCCATGCTTTCCAATGGGGATATAAAAAATATTGCTGACTCAAGGTTTAAGGAAGATTTTGACACTAGCTCAGTCTGGAGAATTGTTGAAATCGGAATGGCTTCTGTGTCCATTAGTCCTTTCAAAAGGCCAAGTATGAGCTATATAGTGAACGAGCTAAAGGAGTGTTTGACGACAGAATTAGCTCGAAAATATAGTGGTCGTGACACTGAAAACAGTGACTCAATTGAGTTGGTCACTCTGAATTTCACAACTGAACTTGGTCCCCCAGCTAGGTAA 2688 0.3921 MMGMLLQFLYVLFGVLISVVLVQAQDQSGFISIDCGLPESSSYTEKTTSIFYISDAKFIDAGVSKSISPAEKSTHLQQLAYVRSFPSGERNCYRINVTSGTKYLIRATFFYGNYDGLNQPPQFDLHLGPNLWDTVSFPNASLSEISEIIYTPSLDYIHPCLVNKGQGAPFISTIELRTLKNASYVTASAESLAYYRRYDLGSITNLVYRYNYDVYDRIWVPHGFNQWTQLSSTLNHDIFQNDYKLPEVVMSTAATPINASAPFQFYWDPDNVNEKFYIYMHFNEVKILAENETRTFNIFMNGKLFYGPLTPGYLTKNIIYSTSALTGATRYLFSLAKTGTSTLPPIMNAMEIYKVIDFAQSETEQDDVDAITNIKNAYGVDRNWQGDPCGPVAYIWEGLNCSYDNTPRITSLNLSSSGLTGQILSFISELTMLQYLDLSNNSLSGSVPDFLTQLQSLKVLNLAKNNLTGPVPGGLVERSKQGSLSLSLDQNPNLCESDPCIQQTNNKQPDGDQQKNKNNIVIPVVASVAGVLVLLIIVAAAIICGLKRKKPQASDVNIYVETNTPNGSQFASKQRQYTFNELVKITNNFTRILGRGGFGKVYHGFIDDTQVAVKMLSPSAVRGYEQFLAEVKLLMRVHHRNLTSLVGYCNEENNIGLIYEYMANGNLDEIVSGKSSRAKFLTWEDRLQIALDAAQGLEYLHNGCKPPIIHRDVKCANILLNENFQAKLADFGLSKSFPTDGGSYMSTVVAGTPGYLDPEYSISSRLTEKSDVYSFGVVLLEMVTGQPAIAKTPDKTHISQWVKSMLSNGDIKNIADSRFKEDFDTSSVWRIVEIGMASVSISPFKRPSMSYIVNELKECLTTELARKYSGRDTENSDSIELVTLNFTTELGPPAR* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1648 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Gso8g1648 895 PANTHER OS07G0107800 PROTEIN-RELATED 16 895 - -
Gso8g1648 895 PANTHER PUTATIVE-RELATED 16 895 - -
Gso8g1648 895 CDD STKc_IRAK 593 858 - -
Gso8g1648 895 Gene3D Phosphorylase Kinase; domain 1 574 661 - -
Gso8g1648 895 Gene3D Ribonuclease Inhibitor 368 491 IPR032675 -
Gso8g1648 895 ProSiteProfiles Protein kinase domain profile. 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1648 895 Pfam Protein tyrosine and serine/threonine kinase 589 856 IPR001245 GO:0004672|GO:0006468
Gso8g1648 895 SUPERFAMILY Protein kinase-like (PK-like) 568 856 IPR011009 -
Gso8g1648 895 Pfam Malectin-like domain 33 355 IPR024788 -
Gso8g1648 895 Pfam Leucine rich repeat 407 467 IPR001611 GO:0005515
Gso8g1648 895 ProSitePatterns Protein kinases ATP-binding region signature. 593 614 IPR017441 GO:0005524
Gso8g1648 895 SUPERFAMILY L domain-like 377 480 - -
Gso8g1648 895 Gene3D Transferase(Phosphotransferase) domain 1 662 880 - -
Gso8g1648 895 SMART serkin_6 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1648 895 PRINTS Leucine-rich repeat signature 433 446 - -
Gso8g1648 895 PRINTS Leucine-rich repeat signature 454 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1648 Gso-Chr8 16149193 16154102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1648 8 895 Receptor kinase-like Gene Family AT1G51800 49.282 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g1648 Malectin_like 2.9e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1648 - - gmx:100779474 1758.81