Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1647 ATGCATACAGATAGTATGAGGAGCGCACTGGTATGGATTTTTACCTTGAACGTTTGCCTTCAAATTTTATTTATTCCTGGTGGTGACTCAAAGCCGCATCCACGTTTCAGAGAGAAAATCACTGAGGATTACAATCCCGGATTTATAAGCATTGACTGTGGAGCAAGTAACGATTACTTGGACGAGGAAACAAGTATCTTTTTTAAGACAGACACAGATTTCATAGAAACGGGAGAAAACTTCTTGACGTCTTCCCAATTTATTCAGACAAATGACCCTGATTTGGGAAGACAGCTACACACACTCAGAAGCTTCCCTGAGGGAAATAGGAACTGTTATACTCTGAAGCCTGAGTATAAGCAAGGTGAACAGAAAAGTTATCTGATTCGGGCAATGTTCGGATATGGAAACTACGATGGAAAAAATCATGCCCCTACGTTCGATCTCTATCTTGGGGTCAACTACTGGATAAATGTTAACACGGCAACAAATTCCTATATTTGGACGGAGATTATTCATGCTCCCACAACAGACACCATACAAGTGTGTCTCGTAAATATTGACACTGGTACACCTTTCATTTCGTCATTAGAGTTACGACCTTTAAGCACTTCCATTTACCAAATCATGTCACAATCATATCTACACCTCAAGGGGCGGTTTGATGTCGGTGGCCCTGTTGTAAACTTTTATAAAAGGTACAAGGACGATATCTATGATCGCAGGTGGTACTGGCGCGATGTTAAAGATTGGTATAAGATCAATACAACCATAGATGTTAATAAATCTGGCAATGATATTTATCAAGTACCAGCTGAAATCTTGAAAACCGCAGTGCAGTCCTTCAATCGCTCATATGACTTGTACCATGACTATGAAATTGAATGGAATGTTCACTTGAACAAGTATTCCAGATATTATGTCTACTTTCACTTTGCTGAAATTCAAAAGCTTGCTCCAGGGCTCAGAAGGATAATCAACATCACTCTCAATGATGAAAACATACTCTCTGAGCCTATAACTCTCGAATATATGAAGCCTGTCACTATTAGTAACAAAAATGCAACTCAAGGTTTCGTTCGCTTTTCAATTAGAGCAACTGCAGAATCGGATGCTCCCCCAATTCTCAATGCTTTTGAGGTTTATGAATTAATAACAGATCTAAATTCACCAACAGATATTAAAGATGTTGATGCCATGGAGAACATCAAACGCTACTATGGGATATCCAGAATAGATTGGCAAGGGGACCCATGCGTTCCAGAAATATTCAGATGGAGTGGCCTGGACTGCAGCTACGGCATCAATCCTAGAATCATATCATTGAACCTTAGCTCAAGCAAACTAGGAGGGCAGATAGCCGCTTCAGTCTCAGATCTTTCAGAACTACAGTCCCTGGATGTCTCAGATAACAGTTTAAATGGTTTTGTGCCCGAGTCATTATCTCAACTTGAGTACCTGAGGATTTTAAATATAGGAGGGAATAAGCTATCGGGGTCAATTCCTGCAAAACTAATTGAGAGATCAAAGAATGGGTCACTAATATTAAGTGTTGATGGAAATCAAAATCTTTGCACCTCGACTCAATGCCACAAGAGAAACAGGGTTGTAATTCCGTTGGTAGTAACACTTGTGGGAGCCTTCATCCTTTCGGCAGTATCACTATTTGTTTTTAGAAGAGTACAAGTTGTTGTGAGTATGACGAAGTTGAAGTTTTCCAACAAAATGGAATATGTAGACTCGAAGAAACAAGAGTTCAGCTACTCAGAGGTTCAAAGTATTACGAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACTATGGTTGCATAGGTGAAACACAAGTAGCCGTGAAGATGCTCTCTCATTCTTCAACTCAAGGTGTTCAGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAGATGCTTGACTCCACTTATTGGATATTGCAATGAAGGCACCAGAACAGCACTCATCTATGAATACATGACCAACGGAGACCTAGCTGAGAAGCTATCAGGTCAAAGTCAAACATTCTTAGGTTGGGAACAGAGATTTCAAATTGCTTTGGATTCTGCAATAGGCTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTATTCACAGAGATGTTAAGACTAGAAATATTTTACTCGACGAGAATCTCCGCGCCAAAATATCTGATTTTGGATTGTCAAGAATCTTTTCAGATGATGGTGACACCCATGTATCAACAGCAATTGCAGGCACCCCAGGATACCTTGACCCAGAATACAACACAACAAACAGGTTGAATGAAAAAAGTGACGTGTATAGTTTTGGGATTGTTCTTCTAGAGATAATCACGGGGAGGACAGTCATACTCAAAGCCCAGGTGAGAACTCACATAATCAAATGGGTAAGTTCCATGCTGGCTGATGATGGTGAAATTGATGGTGTTGTGGATACAAGGTTACAAGGAGAATATGACAGTGAGGCTGCAAGGAAAGTAATAGATGTTGCAATGGCCTGTGTTGCTCCGAGTTCTGTTAATAGGCCAACAATGAATCAAGTGGTCATGGAACTAAAACAATGTTTCCCCGTGGGGAAACTTGGGACTACGTCCACTGGATCCAGTGAAATTGTCTCTGCGGGTGAAATTAGCGGACTTAGTTCTCTAGCCAGGTAA 2694 0.4061 MHTDSMRSALVWIFTLNVCLQILFIPGGDSKPHPRFREKITEDYNPGFISIDCGASNDYLDEETSIFFKTDTDFIETGENFLTSSQFIQTNDPDLGRQLHTLRSFPEGNRNCYTLKPEYKQGEQKSYLIRAMFGYGNYDGKNHAPTFDLYLGVNYWINVNTATNSYIWTEIIHAPTTDTIQVCLVNIDTGTPFISSLELRPLSTSIYQIMSQSYLHLKGRFDVGGPVVNFYKRYKDDIYDRRWYWRDVKDWYKINTTIDVNKSGNDIYQVPAEILKTAVQSFNRSYDLYHDYEIEWNVHLNKYSRYYVYFHFAEIQKLAPGLRRIINITLNDENILSEPITLEYMKPVTISNKNATQGFVRFSIRATAESDAPPILNAFEVYELITDLNSPTDIKDVDAMENIKRYYGISRIDWQGDPCVPEIFRWSGLDCSYGINPRIISLNLSSSKLGGQIAASVSDLSELQSLDVSDNSLNGFVPESLSQLEYLRILNIGGNKLSGSIPAKLIERSKNGSLILSVDGNQNLCTSTQCHKRNRVVIPLVVTLVGAFILSAVSLFVFRRVQVVVSMTKLKFSNKMEYVDSKKQEFSYSEVQSITNNFERVVGKGGFGTVYYGCIGETQVAVKMLSHSSTQGVQQFQTEANILTRVHHRCLTPLIGYCNEGTRTALIYEYMTNGDLAEKLSGQSQTFLGWEQRFQIALDSAIGLEYLHNGCKPPIIHRDVKTRNILLDENLRAKISDFGLSRIFSDDGDTHVSTAIAGTPGYLDPEYNTTNRLNEKSDVYSFGIVLLEIITGRTVILKAQVRTHIIKWVSSMLADDGEIDGVVDTRLQGEYDSEAARKVIDVAMACVAPSSVNRPTMNQVVMELKQCFPVGKLGTTSTGSSEIVSAGEISGLSSLAR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1647 897 SMART serkin_6 596 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1647 897 Pfam Malectin-like domain 51 383 IPR024788 -
Gso8g1647 897 ProSiteProfiles Protein kinase domain profile. 596 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1647 897 CDD STKc_IRAK 602 866 - -
Gso8g1647 897 ProSitePatterns Protein kinases ATP-binding region signature. 602 623 IPR017441 GO:0005524
Gso8g1647 897 Pfam Protein tyrosine and serine/threonine kinase 598 864 IPR001245 GO:0004672|GO:0006468
Gso8g1647 897 Pfam Leucine rich repeat 441 497 IPR001611 GO:0005515
Gso8g1647 897 Gene3D Ribonuclease Inhibitor 401 524 IPR032675 -
Gso8g1647 897 Gene3D - 219 385 - -
Gso8g1647 897 PANTHER OS07G0107800 PROTEIN-RELATED 44 863 - -
Gso8g1647 897 SUPERFAMILY L domain-like 423 505 - -
Gso8g1647 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Gso8g1647 897 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 44 863 - -
Gso8g1647 897 SUPERFAMILY Protein kinase-like (PK-like) 581 864 IPR011009 -
Gso8g1647 897 Gene3D Transferase(Phosphotransferase) domain 1 671 871 - -
Gso8g1647 897 Gene3D Phosphorylase Kinase; domain 1 578 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1647 Gso-Chr8 16120120 16131533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1647 47 881 Receptor kinase-like Gene Family AT2G19210 44.561 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g1647 Malectin_like 7.1e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1647 - - gmx:102663143 1790.01