Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1646 ATGATAGACTTAAGGAAAGTGTGTCTGGTCATTGTGTTGTACATGCATACAGATAGTATGAGGAGCGCACTGGTATGGATTTTTACCTTGAACGTTTGCCTTCACATTTTATTTATTCCTGGTGGTGACTCAAAGCCGCATCCGCGTTTCAGAGAGAAAATCACTGAGGATTACAATCGCGGATTTATAAGCATTGACTGTGGAGCAAGTAACGATTACTTGGACGAGGAAACAAGTACATTTTATAAGACAGACACAGATTTCATAGAAACGGGAGAAAACTTGTTGGCGTCTTCCCAATTTATTGACATAAATATCCCTGGTTTTGGAAGACAACTACGCACATTGAGAAGCTTCCCTGAGGGAAATAGGAACTGTTATACTCTGAAGCCCGAGTATAAGCAAGGTGAACAGCAAAGTTATCTGATTCGGGCTATGTTCGGATATGGAAACTACGATGGAAAAAATCATCCCCCTACGTTCGATCTCTATCTTGGGGTCTACTACTGGATAAATGTTAACCCGGCAAAATATTCCTATCTTTGGACCGAGATTATTCATGCTCCCACAACAGACACCATACAAGTGTGTCTGGTTAATATTGACACTGGTACACCTTTCATTTCGTCATTAGAGTTACGACCTTTAAGCACTTCCATTTACCAAATCATGTCACAATCATATCTACACCTCTGGGGGCGGTTTGATGTCGGTGGCCCTGTTGAAACCTATTATAAAAGGTACAAGGACGATATCTACGATCGCAGGTGGTACTCGCCCGATGTTAAAGATTGGTATAAGATCAATACAACCATAGATGTTAATAAATCTGGCAATGATATTTATAAAGTACCAGCTGAAGTCTTGAAAACCGCAGTGCAGTCCTTCAATCGCTCATATGACTTGTACTATGACTATGAAATTGAATGGAATGTTCACTTGAACAAGTATTCCAGATATTATGTCTACTTTCACTTTGCTGAAATTCAAAAGCTTGCTCCAGGGCTCAGAAGGATAATCAACATCACTCTCAATGATGAAAACATACTCTCTGAGCCTATAACTCTCGAATATATGAAGCCTGTCACTATTAGTAACAAAAATGCAACTCAAGGTTTCGTTCGCTTTTCAATTAGAGCAACTGCAGAATCGGATGCTCCCCCAATTCTCAATGCTTTTGAAGTTTATGAATTAATAACAGATCTAAATTCACCAACAGATATTAAAGATGTTGATGCCATGGAGAACATCAAACGCTACTATGGGATATCCAGAATAGATTGGCAAGGGGACCCATGTCTTCCAGAAAAGTTCAGATGGAGTGGCCTGGACTGCAGCTACGGCATCAATCCTAGAATCATATCATTGAACCTTAGCTCAAGCAAACTAGGAGGGCAGATAGCCGCTTCAGTCTCAGATCTTTCAGAACTACAGTCCCTGGATGTCTCAGATAACAGTTTAAATGGTTTTGTGCCCGAGTCATTATCTCAACTTGAGTACCTGAGGATTTTAAATATAGGAGGGAATAAGCTATCGGGGTCAATTCCTGCAAAACTAATTGAGAGATCAAAGAATGGGTCACTAATATTAAGTGTTGATGGAAATCAAAATCTTTGCACCTCGACTCCATGCCACAAGAGAAACAGGGTTGTAATTCCGTTGGTAGCAACACTTGCGGGAGCCTTCATCCTTTTGGCAGTATCATTATTTGTTTTTAGAAGAGTACAAGTTGTTGTGAGTATGAAGAAGTTGAAGTTTTCCAACAAAATGGAATATGTAGACTCGAAGAAACAAGAGTTCAGCTACTCAGAGGTTCAAATGATTACGAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACTATGGTTGCATAGGTGAAACACGAGTAGCCGTGAAGATGCTCTCTCATTCAACTCAAGGTGTTCGGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAGATGCTTTACTCCACTTATTGGATATTGCAATGAAGGCACCAGAACAGCACTCATCTATGAATACATGACCAACGGAGACCTAGCTGAGAAGCTATCAGGTGAAAGTCAAACATTCTTAGGTTGGGAACAGAGATTTCAAATTGCTTTGGATTCCACAATAGGCTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTATTCACAGAGATGTTAAGACTAGAAATATTTTACTCGACGAGAATCTCCGCGCCAAAATATCTGATTTTGGATTGTCAAGAATCTTTTCAGATGATGGTGACACCCATATATCAACAGCAATTATTGCAGGCACCCCAGGATAA 2328 0.4016 MIDLRKVCLVIVLYMHTDSMRSALVWIFTLNVCLHILFIPGGDSKPHPRFREKITEDYNRGFISIDCGASNDYLDEETSTFYKTDTDFIETGENLLASSQFIDINIPGFGRQLRTLRSFPEGNRNCYTLKPEYKQGEQQSYLIRAMFGYGNYDGKNHPPTFDLYLGVYYWINVNPAKYSYLWTEIIHAPTTDTIQVCLVNIDTGTPFISSLELRPLSTSIYQIMSQSYLHLWGRFDVGGPVETYYKRYKDDIYDRRWYSPDVKDWYKINTTIDVNKSGNDIYKVPAEVLKTAVQSFNRSYDLYYDYEIEWNVHLNKYSRYYVYFHFAEIQKLAPGLRRIINITLNDENILSEPITLEYMKPVTISNKNATQGFVRFSIRATAESDAPPILNAFEVYELITDLNSPTDIKDVDAMENIKRYYGISRIDWQGDPCLPEKFRWSGLDCSYGINPRIISLNLSSSKLGGQIAASVSDLSELQSLDVSDNSLNGFVPESLSQLEYLRILNIGGNKLSGSIPAKLIERSKNGSLILSVDGNQNLCTSTPCHKRNRVVIPLVATLAGAFILLAVSLFVFRRVQVVVSMKKLKFSNKMEYVDSKKQEFSYSEVQMITNNFERVVGKGGFGTVYYGCIGETRVAVKMLSHSTQGVRQFQTEANILTRVHHRCFTPLIGYCNEGTRTALIYEYMTNGDLAEKLSGESQTFLGWEQRFQIALDSTIGLEYLHNGCKPPIIHRDVKTRNILLDENLRAKISDFGLSRIFSDDGDTHISTAIIAGTPG* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1646 775 ProSiteProfiles Protein kinase domain profile. 610 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1646 775 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 57 775 - -
Gso8g1646 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Gso8g1646 775 Gene3D - 233 399 - -
Gso8g1646 775 PANTHER OS07G0107800 PROTEIN-RELATED 57 775 - -
Gso8g1646 775 Pfam Protein tyrosine and serine/threonine kinase 612 762 IPR001245 GO:0004672|GO:0006468
Gso8g1646 775 Pfam Leucine rich repeat 455 511 IPR001611 GO:0005515
Gso8g1646 775 SMART serkin_6 610 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1646 775 Pfam Malectin-like domain 65 397 IPR024788 -
Gso8g1646 775 SUPERFAMILY L domain-like 436 520 - -
Gso8g1646 775 SUPERFAMILY Protein kinase-like (PK-like) 594 774 IPR011009 -
Gso8g1646 775 Gene3D Ribonuclease Inhibitor 415 538 IPR032675 -
Gso8g1646 775 Gene3D Transferase(Phosphotransferase) domain 1 684 775 - -
Gso8g1646 775 Gene3D Phosphorylase Kinase; domain 1 592 683 - -
Gso8g1646 775 ProSitePatterns Protein kinases ATP-binding region signature. 616 637 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1646 Gso-Chr8 16092700 16101464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1646 61 775 Receptor kinase-like Gene Family AT2G19210 43.210 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g1646 Malectin_like 6e-86 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1646 - - gsj:114422345 1571.99