Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1642 ATGCTAAAGTGCAGAGAGCATGAGCTAGCATCTATATATGCCATAATAGACTTAAGGAAAGTGTGTCTGGTCATTGTGTTGTACATGCATACAGATAGTATGAGGAGCGCACTGGTATGGATTTTTACCTTGAACGTTTGCCTTCAAATTTTATTTATTCCTGGTGGTGACTCAAAGCCGCATCCACGTTTCAGAGAGAAAATCACTGAGGAGTACAATCCCGGAAGACAGCTACACACATTGAGAAGCTTCCCTGAGGGAAATAGGAACTGTTATACTCTGAAGCCCGAGTATAAGCAAGGTGAACAGCAAAGTTATCTGATTCGGGCTATGTTCGGATATGGAAACTACGATGGAAAAAATCATGCCCCTACGTTCGATCTCTATCTCGGGGTCAACTACTGGAAAAATGTTAACACGGCAGACAGATCCTATATTTGGGCCGAGATTATTCATGCTCCCACAACAGACACCATACAAGTGTGTCTGGTTAATATTGACACTGGTACACCTTTCATTTCGTCATTAGAGTTACGACCTTTAAGCACTTCCATTTACCAAATCATGTCACAATCATATCTATACCTCCATGGGCGGTTTGATGTCGGTGGCCCTGTTGAAACCTATTATAAAAGGTACAAGGACGATATCTATGATCGCAGGTGGTACTGGCGCGATGTTAAAGATTGGTATAAGATCAATACAACCATAGATGTTAATAAATCTGGCAATGATATTTATAAAGTACCAGCTGAAGTCTTGAAAACCGCAGTGCAGTCCTTCAATCGCTCATATGACTTGTACTATGACTATGAAATTGAATGGAATGTTCTCTTGGACAAGTATTCCAGATATTATGTCTACTTTCACTTTGCTGAAATTCAACAGCTTGCTCCAGGGCTCAGAAGGATAATCAACATCACTCTCAATGATGAAAACATACTCTCTGAGCCTATAACTCTCGAATATATGAAGCCTGTCACTATTAGTAACAAATATGCAACTCAAGGTTCCGTTCGCTTTTTAATTAGAGCAACTGCAGAATCGGATGCTCCCCCAATTCTCAATGCTTTTGAGGTTTATCAATTAATAACAGATCTAAATTCAACAACAGATATTAAAGATGTTGATGCCATGGAGAACATCAAACGCTACTATGGGATATCCAGAATAGATTGGCAAGGGGACCCATGTCTTCCAGAAAAATTCAGATGGAGTGGCCTGGACTGCAGCTACGGCATCAATCCTAGAATCATATCATTGAACCTTAGCTCAAGCAAACTAGGAGGGCAGATAGCCGCTTCAGTCTCAGATCTTTCAGAACTACAGTCCCTGGATGTCTCAGATAACAGTTTAAATGGTTTTGTGCCCGAGTCATTATCTCAACTTGAGTACCTGAGGATTTTAAATATAGGAGGGAATAAGCTATCTGGGTCAATTCCAGCAAAACTAATTGAGAGATCAAAGAATGGGTCACTAATATTAAGTGTTGATGGAAATCAAAATCTTAGCACCTCGACTCCATGCCACAAGAGAAACAAGGTTGTAATTCCGTTGGTAGTAACACTTGTGGGAGCCTTCATCCTTTCGGCAGTATCACTATTTGTTTTTAGAAGAGTACAAGTTGTTGTGAGTATGAAGAAGTTGAAGTTTTCCAACAAAATGGAATATGTAGACTCGAAGAAACAAGAGTTCAGCTACTCAGAGGTTCAAAGTATTACGAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACTATGGTTGCATAGGTGAAACACAAGTAGCCGTGAAGATGCTCTCTCATTCAACTCAAGGTGTTCGGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAGATGCTTTACTCCACTTATTGGATATTGCAATGAAGGCACCAGAACAGCACTCATCTATGAATACATGACCAACGGAGACCTAGCTGAGAAGCTATCAGGTCAAAGTCAAACATTCTTAGGTTGGGAACAGAGATTTCAAGTTGCTTTGGATTCTGCAATAGGCTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTATTCACAGAGATGTTAAGACTAGAAATATTTTACTCGACGAGAATCTCCGCGCCAAAATATCTGATTTTGGATTGTCAAGAATCTTTTCAGATGATGGTGACACCCATGTATCAACAGCAATTGCAGGCACCCCAGGATACCTTGACCCAGAATACAACATAACAAACAGGTTGAATGAAAAAAGTGACGTGTATAGTTTTGGGATTGTTCTTCTAGAGATAATCACGGGGAGGACAGTCATACTGAAAACCCAGGTGAGAACTCACATAATCAAATGGGTAAGTTCCATGCTGGCTGATGATGGTGAAATTGATGGTGTTGTGGATACAAGGTTACAAGGAGAATATGACAGTGAGGCTGCAAGGAAAGTAATAGATGTTGCAATGGCCTGTGTTGCTCCGAGTTCTGTTAATAGGCCAACAATGAATCAAGTGGTCATGGAACTAAAACAATGTTTCCCCGTGGGGAAACTTGGGACTACGTCCACTGGATCCAGTGAAATTGTCTCTGCGGGTGAATAG 2601 0.4079 MLKCREHELASIYAIIDLRKVCLVIVLYMHTDSMRSALVWIFTLNVCLQILFIPGGDSKPHPRFREKITEEYNPGRQLHTLRSFPEGNRNCYTLKPEYKQGEQQSYLIRAMFGYGNYDGKNHAPTFDLYLGVNYWKNVNTADRSYIWAEIIHAPTTDTIQVCLVNIDTGTPFISSLELRPLSTSIYQIMSQSYLYLHGRFDVGGPVETYYKRYKDDIYDRRWYWRDVKDWYKINTTIDVNKSGNDIYKVPAEVLKTAVQSFNRSYDLYYDYEIEWNVLLDKYSRYYVYFHFAEIQQLAPGLRRIINITLNDENILSEPITLEYMKPVTISNKYATQGSVRFLIRATAESDAPPILNAFEVYQLITDLNSTTDIKDVDAMENIKRYYGISRIDWQGDPCLPEKFRWSGLDCSYGINPRIISLNLSSSKLGGQIAASVSDLSELQSLDVSDNSLNGFVPESLSQLEYLRILNIGGNKLSGSIPAKLIERSKNGSLILSVDGNQNLSTSTPCHKRNKVVIPLVVTLVGAFILSAVSLFVFRRVQVVVSMKKLKFSNKMEYVDSKKQEFSYSEVQSITNNFERVVGKGGFGTVYYGCIGETQVAVKMLSHSTQGVRQFQTEANILTRVHHRCFTPLIGYCNEGTRTALIYEYMTNGDLAEKLSGQSQTFLGWEQRFQVALDSAIGLEYLHNGCKPPIIHRDVKTRNILLDENLRAKISDFGLSRIFSDDGDTHVSTAIAGTPGYLDPEYNITNRLNEKSDVYSFGIVLLEIITGRTVILKTQVRTHIIKWVSSMLADDGEIDGVVDTRLQGEYDSEAARKVIDVAMACVAPSSVNRPTMNQVVMELKQCFPVGKLGTTSTGSSEIVSAGE* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1642 866 PANTHER OS07G0107800 PROTEIN-RELATED 66 841 - -
Gso8g1642 866 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 66 841 - -
Gso8g1642 866 SUPERFAMILY Protein kinase-like (PK-like) 559 842 IPR011009 -
Gso8g1642 866 Pfam Protein tyrosine and serine/threonine kinase 577 842 IPR001245 GO:0004672|GO:0006468
Gso8g1642 866 SUPERFAMILY L domain-like 401 485 - -
Gso8g1642 866 ProSiteProfiles Protein kinase domain profile. 575 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1642 866 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Gso8g1642 866 Gene3D Ribonuclease Inhibitor 380 503 IPR032675 -
Gso8g1642 866 Pfam Leucine rich repeat 420 476 IPR001611 GO:0005515
Gso8g1642 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Gso8g1642 866 Gene3D Phosphorylase Kinase; domain 1 557 648 - -
Gso8g1642 866 SMART serkin_6 575 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1642 866 Gene3D Transferase(Phosphotransferase) domain 1 649 849 - -
Gso8g1642 866 Pfam Malectin-like domain 70 362 IPR024788 -
Gso8g1642 866 Gene3D - 198 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1642 Gso-Chr8 16046974 16056409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1642 76 859 Receptor kinase-like Gene Family AT2G19210 44.305 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso8g1642 Malectin_like 7e-81 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1642 - - gsj:114422341 1699.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0118 7 1069039 1074215 Gso8g1642 8 16046974 16056409 GST
Gso11g3617 11 51845729 51850502 Gso8g1642 8 16046974 16056409 PCT