Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1623 ATGGAAAGCAATGTTAAAGCAAAAAGCAATCATGGAAAAGTTTCTGCTTCTGCATCAGCATCAAATAAGTCACCAGCAATGAAGAAGGATTTAATTTGCAAGTATTGCAACAAGAAGTTCAATAATTATCAAGCCTTGGGTGGACATCAGAATGCACACAAGAATGAAAGAGCAGCAGCACAAAAACAGAAGATTCTTAGCATGGCTTCTGCTTATAACAAAAATTCATATGCTGATGGGTTTGTTAATTCAAACCAATCTTATGGATTTGGTGGCAAAATATTAGGGGTGTCACCACTATCCATGACTCGTTTTAAGCCCCATTATTATAGTAATTGGTCTCATAATCATATGTCACATGTTGCATGGCCAAGGCACCAGATTTTGAATAGTGTTCAACCCACCATTCATCAGTTGCAGACTTTGATGATGGCTGATCAAGGGAGTGGATTTTATCGGCACCATAAATCATATCAACAACCTTTAAGTTTTCCTATACTTAGAGAAGGAGCAGTACTAAATTCAGGGTCGCAATCAGAGTTATTAAATCCTAGTTTATGTTATAAGGGGAATAATTTTGGTCAAGCAAGCAATTCTTCAATAATACCTCAGAATGGAATCATAGAGGGGTCTGAGGATTTGAATATCAAGACTTCTGGTGAAGCAAAAAACAGTTTTTCTTCGATGCTTGCCAATGGAGACGTGATGGAGCTTGATTTGACTCTCAAAATTTAG 735 0.3714 MESNVKAKSNHGKVSASASASNKSPAMKKDLICKYCNKKFNNYQALGGHQNAHKNERAAAQKQKILSMASAYNKNSYADGFVNSNQSYGFGGKILGVSPLSMTRFKPHYYSNWSHNHMSHVAWPRHQILNSVQPTIHQLQTLMMADQGSGFYRHHKSYQQPLSFPILREGAVLNSGSQSELLNPSLCYKGNNFGQASNSSIIPQNGIIEGSEDLNIKTSGEAKNSFSSMLANGDVMELDLTLKI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1623 244 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Gso8g1623 244 PANTHER ZINC FINGER PROTEIN JAGGED 12 243 IPR045320 GO:0003700
Gso8g1623 244 PANTHER ZINC FINGER PROTEIN KNUCKLES 12 243 - -
Gso8g1623 244 MobiDBLite consensus disorder prediction 1 21 - -
Gso8g1623 244 Pfam C2H2-type zinc finger 32 54 - -
Gso8g1623 244 Gene3D Classic Zinc Finger 8 88 - -
Gso8g1623 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Gso8g1623 244 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1623 Gso-Chr8 15868011 15868745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1623 25 62 C2H2 Transcription Factor Family AT5G14010 60.526 7.73e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso8g1623 zf-C2H2_6 1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1623 - - gmx:106799535 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0105 7 955921 956649 Gso8g1623 8 15868011 15868745 GST