Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1611 ATGAGTCAAGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGCGTTGAGAAGGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTCAGTCATGTTGTTCAACCTGGGGATTGCATTACACTACTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCGAGATTTGCTGGTGATTGTGCCAGTGGTATTAAGAAGTACCCTCCAGGAACAATATCAGAGCAGAAGAGTGACATCACTGATTCTTGCTCTCAGATGATCCTACAGCTTCATAATGTCTATGATCCAAACAAGATAAATGTCAGGATTAAAATTGTATCCGGATCACCTTGTGGAGCAGTGGCTGCCGAAGCCAAGAAAGCACAAGCCAATTGGGTTGTATTAGACAAACAGCTTAAACATGAGGAAAAGCGATGCATGGAAGAACTGCAGTGTAACATTGTAGTTATGAAGCGTTCTCAGCCTAAAGTACTGCGCTTGAATTTGATTGGACCACAGAAGAAGGAAGTTGAAGAAGCAGGTCCATCACCTTCTGAGCAAGATGACATGCCTGAAAACCGAACCAAAATAAAGCTGGATTCCTTAAATTCTATCAAAGGACCAGCTGTAACTCCAACTAGCAGCCCTGAGCTAGGGACACCATTCACTGCAACTGAAGCTGGTACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTCATATCAGAGATGAATGGTGAGTTCAAAAAAGAGGAAACTATCAAGGAAAGTCAAGAACTTGTTGATACTAATTCAGACACAGAAAGTGAAAGTCTATCCACATCTTCAGCAAGCATGAGATACCAGCCATGGATAACAGAATTGCTTTTACATCAACCATCAACACAATGCAATGAAGAGAGATCAGAGATGTCTCACGGTATGCCTCAAGCATCAACAACCAGAGCTTTCCTAGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCAACCTATAGAAATGACATGGATTTCAGTGGGAATTTAAGAGAAGCAATAGCATTATCTGGAAACGCCCCACCTGGTCCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAACTTGCTACTGGCGGATTTTCACAGGCCAACTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCACCGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATCTTGAATTTTGCTCAGAGGTGGAAGTCTTGAGCTGTGCTCAGCACCGCAATGTTGTTATGCTCATTGGGTTCTGTATAGAGGATAAAAGAAGGCTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAACGGGATCCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGTTTACGATATCTTCATGAAGAGTGCAGAGTAGGTTGTATTATCCACCGTGACATGAGGCCAAACAATATTCTCATAACTCATGATTTTGAACCTCTGGTTGGCGATTTTGGTCTGGCGAGGTGGCAGCCTGATGGGGACACAGGTGTCGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACTGGGAGAAAAGCTGTGGATCTCACTAGGCCAAAGGGGCAGCAATGCCTTACTGAGTGGGCACGACCACTTTTGGAAGAAGATGCCATTGAGGAACTGATTGATCCAAGGCTTGGTAACCACTATTCAGAACACGAGGTCTATTGTATGCTGCATGCTGCATCATTATGCATACAGCGAGATCCTCAATGTAGACCACGCATGTCACAGGTTCTCCGAATACTAGAAGGTGACATGGTGATGGACTCAAATTACATCTCAACTCCAGGTTATGATGCAGGAAACCGGAGTGGTAGACTTTGGTCAGAGCCGTTACAAAGGCAGCACCATTATAGTGGTCCCCTTTTAGAAGAGTCTCTGGAGTCCTTCAGTGGAAAGCTATCCCTTGACAAGTACAAGCCTTCCTATTGGGGAGATAGGGACAAGGCTAGAAGGGCTTCATGTGTAGATGACATCTGA 2253 0.4407 MSQEQQKRGKQEKGSDGVEKVIVAVKASKEIPKTALVWSLSHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDITDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKEVEEAGPSPSEQDDMPENRTKIKLDSLNSIKGPAVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNGEFKKEETIKESQELVDTNSDTESESLSTSSASMRYQPWITELLLHQPSTQCNEERSEMSHGMPQASTTRAFLEKYSRLDRGAGFEISTYRNDMDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEDAIEELIDPRLGNHYSEHEVYCMLHAASLCIQRDPQCRPRMSQVLRILEGDMVMDSNYISTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYKPSYWGDRDKARRASCVDDI* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1611 750 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Gso8g1611 750 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Gso8g1611 750 PANTHER OS01G0253100 PROTEIN 16 708 IPR045271 GO:0004714|GO:0006468
Gso8g1611 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Gso8g1611 750 MobiDBLite consensus disorder prediction 208 248 - -
Gso8g1611 750 CDD USP_Like 20 143 - -
Gso8g1611 750 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1611 750 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Gso8g1611 750 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Gso8g1611 750 MobiDBLite consensus disorder prediction 214 248 - -
Gso8g1611 750 MobiDBLite consensus disorder prediction 182 201 - -
Gso8g1611 750 CDD STKc_IRAK 409 675 - -
Gso8g1611 750 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1611 Gso-Chr8 15745057 15751060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1611 383 692 Trihelix Transcription Factor Family AT1G70460 51.562 1.61e-101 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso8g1611 PK_Tyr_Ser-Thr 6.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1611 - - gmx:100783226 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0097 7 854646 860562 Gso8g1611 8 15745057 15751060 GST
Gso15g0206 15 1848929 1854900 Gso8g1611 8 15745057 15751060 PCT
Gso11g3606 11 51745359 51751183 Gso8g1611 8 15745057 15751060 PCT
Gso8g1611 8 15745057 15751060 Gso15g0206 15 1848929 1854900 PCT
Gso8g1611 8 15745057 15751060 Gso11g3606 11 51745359 51751183 PCT