Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1610 ATGGCTTCGAGCTCTGCGGCGGAAGGAGTATCAATGGACGATGATTACGAAACCTTGATTGCAACCACCGACGTGGAGCTTCTGAAGAGAGCGTGGCGCAACGAGAAGGCGGCCCCAGAGATTCTCCGCTACGAATCTAAATTGGTTTCCCGCGTCAACAAAGTCATTCAACTCATGGAAGAAATTGTGGAGGAAAAATCCAGTGGCGGTACTGATCCTCTTTCGGTGTCTCTATATCAGATGGACTTGGATAGAACTCTCTTTTTGTTAAGATCCTATCTCAGGATCCGCATCCAGAAGATTGAAAAGTACGTGTTCCACATCCAAAAAACTGAAGAACTTAGGAACAGGCTATCTAAATACGAGAAAGATTTTGCCAAAATGTGTGAAAATGACCTAGAGCAACATCTGGATGAGAGTGTTCTGTCGAAGTTGCCTAAAGATTATAAGTCTGTTCTGAGGCAATCTTCAATGAGTGAAGAGGATGACATGGTCCCAGAACCACAACTAGACGCATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGCATTCAACTCGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCACTTCATATGTTACAAATCAATAAAGGCACTTGTAGAGAGTGGCAAAATTGATCTCCTCTGA 681 0.442 MASSSAAEGVSMDDDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLMEEIVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLSKYEKDFAKMCENDLEQHLDESVLSKLPKDYKSVLRQSSMSEEDDMVPEPQLDAFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1610 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Gso8g1610 226 SUPERFAMILY GINS helical bundle-like 21 153 IPR036224 -
Gso8g1610 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Gso8g1610 226 Pfam GINS complex protein 67 123 IPR021151 -
Gso8g1610 226 Gene3D - 11 216 - -
Gso8g1610 226 PANTHER SLD5 PROTEIN 6 226 IPR008591 GO:0006261
Gso8g1610 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
Gso8g1610 226 Coils Coil 111 131 - -
Gso8g1610 226 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1610 Gso-Chr8 15739790 15743333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1610 1 164 Core DNA Replication Machinery Family AT5G49010 60.976 3.63e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1610 K10735 - gmx:100784291 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0096 7 847103 850373 Gso8g1610 8 15739790 15743333 GST