Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1607 ATGAATATTTTAACCGTAAGAGCAATCGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATCTTCAATGCCACACCTTACTCACCTTTGTTTCCCTTCAATTGCATATGTGCAAATGGAAATCCTGCTTACGTGACTATAAAGATAGACAGCCAGAAGTTTGCAAAAACCAGCCAAGAAAGCAACCGTGTGTGGAACCAAACTTTTCAGATTCAATGTGCTCATCCAGCTGATTCATGCATCACCATTACCCTTAAAACATCGCGTTCTTCCGTATTGGGAAAATTCCATATTCAGGCTCAGCAGCTATTGAAGAAAGGAGGCTTGATCAACGGCTTCTTCCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTTAAGTTGAAGTTCCAGCTATGGTTCAAGCCGGCTGAATTGGAACCGAGTTGGGCAAAGATGTTGAGCAATGACTGGGAATTTCAAGGGCTGAGGGAGGCTACCTTCCCACTAAGGTCAAATTGTCATGTCAAACTTTATCATGATGCTCACCATTCTTCTGCTTTTCAACCTCCATTTGATCTATGTGGAGCTCCAAAAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGATGCGAAGTACTTAGTTTATATTGCAGGGTGGTCCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCACACAGAAATCCCACATGCCAGAGGAATTAAGTTAGGTGAACTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTTTGGGATGATGAAACATCTTTGCCCTTTGTTAAGAACAAAGGTGAACTGAACAACCAAGACGAAGAAGCTTTTGCTTATTTCAACCACACAAAAGTAATATGCAGAAAGTGTCCCAGGTTACACCATATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACAAAAGCACCCAAATCTGTCGGCGACAGAGAACTTATGAGCTTTCTGGGTGGATTAGATTTGTGTGATGGAAGATATGACACAGAGCAACATTCATTGTTTCAAACACTCATTAGGGAATCTCATTGTTATGACTTCTACCAAACAAGCATTGAAGGAGCTAGCCTCAACAAAGGAGGACCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAGGCTGCTTGGGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAGTCCCTTCTAGCACCTTGGCAAATCTTATGCCTAGGACAAGCTCAAGCACTCTTATGGAGAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTCTCAGTTAGTGAGTTGTCTACAAAGTTAAATGTGGAGAGGAGCATCCATGAGGCTTATGTTGAAGCAATTAGGCGTGCCGAAAGGTTTATTTACATCGAAAACCAATATTTCATTGGGGGGTGCCATTGGTGGAAGAAAGATAGGCACAGTGGCTGCACTAATCTAATTCCAATTGAAATTGCGCTCAAGGTGGTAAGTAAGATTAAGGCAAAGGAGAGATTTGCTGTGTACATAGTCATACCAATGTGGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACTAGAGAGACCATGACAATGATGTATAGGTTGATTGGAGAAGCTATACAAGAAAGTGGAGAACCAGCACACCCTAGAGACTACTTGAATTTCTTCTGTCTTGCAAATAGGGAGCAGAAGGGACAAGGGGAGTATCTTCCACTAGATTCTCCCCAACCTGAAACTCAATACTGGAATGCTCAAAAAAATAGGAGATTCATGGTTTATGTTCACTCCAACTTCATGATAGTGGACGACCTGTACATATTAATTGGATCAGCTAATGTAAACCAACGATCCATGGACGGGAAGAGGGACACTGAGATAGCCATAGGATGCTACCAGTCTCAAGATGGAGATGATGATACCAACCAAATGAACCTAGATGATATTCAAGCATATAGAATGTCTCTATGGTATGAGCACACTGTTAGTGTTGATGAGTTGTTCTTAGAGCCACAAAGATTGGAATGTGTGGAGAGAATGCGCTCAATAGGAGATGAAATGTGGGAAATCTACAGCAGTGAAGAAATTGTGGACATGGAAGGGGTGCACCTTGTAACTTACCCTGTGAGAGTAACACAAGAAGGGTATGTGAAAAACCTCACTGATGGAGTTCATTTTCCTGATACAAATTCTCTAGTGAAAGGAAAAAGGTCTAAAATATTGCCCCCTATCTTTACCACTTAG 2313 0.4211 MNILTVRAIEETPKLLHGTIEATIFNATPYSPLFPFNCICANGNPAYVTIKIDSQKFAKTSQESNRVWNQTFQIQCAHPADSCITITLKTSRSSVLGKFHIQAQQLLKKGGLINGFFPLLMDNGKPNPKLKLKFQLWFKPAELEPSWAKMLSNDWEFQGLREATFPLRSNCHVKLYHDAHHSSAFQPPFDLCGAPKKLWEDVYKAIEDAKYLVYIAGWSFNPMMVLVRDPHTEIPHARGIKLGELLKKKAEEGVAVRVMLWDDETSLPFVKNKGELNNQDEEAFAYFNHTKVICRKCPRLHHMFPTLFAHHQKTITVDTKAPKSVGDRELMSFLGGLDLCDGRYDTEQHSLFQTLIRESHCYDFYQTSIEGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLVPSSTLANLMPRTSSSTLMERNWKVQVYRSIDHVSVSELSTKLNVERSIHEAYVEAIRRAERFIYIENQYFIGGCHWWKKDRHSGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGEPESEPVQDILHWTRETMTMMYRLIGEAIQESGEPAHPRDYLNFFCLANREQKGQGEYLPLDSPQPETQYWNAQKNRRFMVYVHSNFMIVDDLYILIGSANVNQRSMDGKRDTEIAIGCYQSQDGDDDTNQMNLDDIQAYRMSLWYEHTVSVDELFLEPQRLECVERMRSIGDEMWEIYSSEEIVDMEGVHLVTYPVRVTQEGYVKNLTDGVHFPDTNSLVKGKRSKILPPIFTT* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1607 770 Gene3D C2 domain 40 139 IPR035892 -
Gso8g1607 770 Pfam Phospholipase D C terminal 688 759 IPR024632 -
Gso8g1607 770 PANTHER PHOSPHOLIPASE D 9 770 IPR015679 -
Gso8g1607 770 SUPERFAMILY Phospholipase D/nuclease 438 696 - -
Gso8g1607 770 Pfam Phospholipase D Active site motif 307 343 IPR001736 GO:0003824
Gso8g1607 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 306 343 IPR001736 GO:0003824
Gso8g1607 770 Pfam C2 domain 46 119 IPR000008 -
Gso8g1607 770 PANTHER PHOSPHOLIPASE D ALPHA 9 770 - -
Gso8g1607 770 SUPERFAMILY Phospholipase D/nuclease 164 416 - -
Gso8g1607 770 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 614 641 IPR001736 GO:0003824
Gso8g1607 770 PIRSF PLD_plant 8 770 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gso8g1607 770 Gene3D Endonuclease Chain A 452 659 - -
Gso8g1607 770 SMART pld_4 306 343 IPR001736 GO:0003824
Gso8g1607 770 SMART pld_4 614 641 IPR001736 GO:0003824
Gso8g1607 770 Gene3D Endonuclease Chain A 185 437 - -
Gso8g1607 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 136 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1607 Gso-Chr8 15722965 15726855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1607 38 770 Phospholipase D Gene Family (Wang group) AT1G55180 63.306 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1607 K01115 - gmx:100812642 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0093 7 829768 833468 Gso8g1607 8 15722965 15726855 GST
Gso15g0209 15 1871694 1875030 Gso8g1607 8 15722965 15726855 PCT
Gso8g1607 8 15722965 15726855 Gso15g0209 15 1871694 1875030 PCT