Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1597 ATGGGACTGCAGCTGATTTTCTTGCTAATTGAGCTGCATTTAGTTTTCTGCACTCAGCAGGTCCATGAATATGCAGCCACCAAGCTGCAACATTCCAGTGACAGAAGCCATTTTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACACCCACCTTCTGAGTCATCTTCTGGTGTACCTGCAAGTATTGCACTTTCAGCTTCCAAGTCAATTCACAAAGCTCCTACAATTATATGGACACATAGTTCTGTGGATTCTCCTATCTTACATCATAAGCATCACTTTTCCAAAAGAAAGTTCTCCAATCCAACTCCAGTGGCAGCGCCAACCTATCCAGTCCAGGCTCCTACATACAGTCATCAAGGTCCTTCAGTCTTCGAATCACAACCTCCTTTCTCCTCACCAAATATTAAGGATATTCATGCCCCTGCAACTGCACCATCACCAGCAATTCTGCCAGGTCACCTGGATGTACCCTCTCCTTCACCTAGAATTTCTCCTCTAGGTTCATCGTTGAAGAAGAAAAAGACTCCATCACCAGCATATACATTGATTCTGCCACCTCCACCTCCTAATAAGGATTGCTTATCGACAACTTGCTTGGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAACTCCATATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTTCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTGCTGAACCATACCCAGGTTCGCATTGTGGGAGCTGATGCAGCTAATCAGCAACTGGAGAAGACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACTGCATTTTTAATATATAAGAAATTCTGGTACAGGGAGATTCTGATAGATGCTTCCGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTCTCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCAGATGCTTCTGGTATAGATGATGGGCCAAATCCAGGACATGACAACAATGGAACGATAATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAAAAAGAAGGGAATAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACCGCTTCTGTTGTATTCATTGGTCTTGCTTGGCTTTGTCTGCTGAAATGCCGTACCTATGTTCATGAACATAAACCAGTTCCAGATGGTTTTATTTCATCCTCTTCAAAACAATCAATCTTAGCAGGGGCTGCTAGGTCATTGACTCAAGGGATCAGGCTAGGCTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACTTGGAGAAAGCAACAAATAACTTTGACTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGGCTTGTTTACAAAGGTATTCTAAATGATGGGAGGGATGTAGCCGTGAAGATTCTCAAAAGAGATGATCAGCGAGGTGGCCGTGAATTCTTGGCAGAAGTTGAAATGCTTAGCCGTCTACATCATAGAAATTTAGTTAAATTATTGGGTATATGCACAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTCGAATCTCACTTACATGTAGCTGACAAGGTAACTGATCCACTGGATTGGAATTCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCCTATCTACATGAAGATTCAAATCCATGTGTCATACATCGAGACTTCAAGGCCAGCAACATCTTGTTGGAGTACGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTATAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAACCACCGGGTCAAGAAAATCTCGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAAGGCTTGCAAATGATCATAGACCCATATGTAAAGCCTAACATTTCTGTTGATACTGTGGTAAAAGTTGCGGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCTCAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTAGTATGCAGTGAGTTTGAGGAAACAGACTTTATAAAATCAAAGGGTTCTCAAGAGGGTCTTCTAACCGATGTGAAAGGAATTTTTTCCGAAGCTTCAGGTGAAAGAGTGGAATTTTCAGAGTGTCAAAAAACTTTTTCTGGCTATCAATCTAATGAAGAAAAGGTAAGATTATCAGCATCAGAGTTGCTCAGTACTTCAGGTCAGGAATTTGAGTCGTTCAGGCAGTATTCTCGTTCAGGGCCTCTAATTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCTCCAGTGAACATGGATCCCATTAA 2562 0.4247 MGLQLIFLLIELHLVFCTQQVHEYAATKLQHSSDRSHFSIAIPPSKSSSEGHSSIAHPPSESSSGVPASIALSASKSIHKAPTIIWTHSSVDSPILHHKHHFSKRKFSNPTPVAAPTYPVQAPTYSHQGPSVFESQPPFSSPNIKDIHAPATAPSPAILPGHLDVPSPSPRISPLGSSLKKKKTPSPAYTLILPPPPPNKDCLSTTCLEPLTYTPPGSPCGCVWPLQVKLHINIAIYKFFPLVSELAKEIAASVLLNHTQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWYREILIDASVFGAYEVLYVHSPGLPPSPPSTPSDASGIDDGPNPGHDNNGTIMKPLGVDVPKKKKEGNNGRMIVIIVLSSVTASVVFIGLAWLCLLKCRTYVHEHKPVPDGFISSSSKQSILAGAARSLTQGIRLGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLLGICTEKQTRCLVYELVPNGSVESHLHVADKVTDPLDWNSRMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPYVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETDFIKSKGSQEGLLTDVKGIFSEASGERVEFSECQKTFSGYQSNEEKVRLSASELLSTSGQEFESFRQYSRSGPLIIGKKRQFWQKLRSLSRGSSSEHGSH* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1597 853 Gene3D Transferase(Phosphotransferase) domain 1 546 764 - -
Gso8g1597 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Gso8g1597 853 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Gso8g1597 853 Pfam Protein tyrosine and serine/threonine kinase 473 743 IPR001245 GO:0004672|GO:0006468
Gso8g1597 853 PANTHER OS01G0750732 PROTEIN 6 851 - -
Gso8g1597 853 ProSiteProfiles Protein kinase domain profile. 470 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1597 853 PANTHER OS01G0750732 PROTEIN 6 851 - -
Gso8g1597 853 SUPERFAMILY Protein kinase-like (PK-like) 449 743 IPR011009 -
Gso8g1597 853 Gene3D Phosphorylase Kinase; domain 1 443 545 - -
Gso8g1597 853 MobiDBLite consensus disorder prediction 327 365 - -
Gso8g1597 853 CDD STKc_IRAK 476 744 - -
Gso8g1597 853 MobiDBLite consensus disorder prediction 38 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1597 Gso-Chr8 15619037 15625338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1597 199 852 Receptor kinase-like Gene Family AT5G56890 59.578 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso8g1597 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1597 - - gmx:100305431 1558.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0084 7 732032 737994 Gso8g1597 8 15619037 15625338 GST
Gso15g0216 15 1962762 1968526 Gso8g1597 8 15619037 15625338 PCT
Gso11g3595 11 51643715 51649289 Gso8g1597 8 15619037 15625338 PCT
Gso8g1597 8 15619037 15625338 Gso15g0216 15 1962762 1968526 PCT
Gso8g1597 8 15619037 15625338 Gso11g3595 11 51643715 51649289 PCT