LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g1595	ATGGCTGCTTCTAATTCTGCCGCTGTTGTTGGTAATGCTTCTTCCTCTCTCTCTCTCTCTGTTACCAAAAAGTATGATGTTTTCATCAGCTTTAGAGGAGAGGACACCCGCGGTGACTTCACAAGCCATCTTCATGCCGCTCTCGGCAGAAGCAGCATCGAAACCTACATAGACTACAGAATCCAGAAAGGAGAGGAGGTTTGGGTCGAACTCGTGAAAGCCATCAAAGGCTCCATTCTCTTCTTGGTTATCTTCTCAGAAAACTACGCAAATTCTAGTTGGTGTTTGAATGAACTGGTTGAACTAATGGAATGCAGAAAACAAGAAGAAGAGGTTCATGTAATTCCAGTGTTCTACAAAGTAGACCCATCGCAGGTACGCAAACAGACTGGGAGTTATCGCGCCGCAGTCGCAAACCAAAAGTGGAAGGACGCTCTCTATGAAGCAGCCAATTTATCTGGCTTCCATTCTCACACATACAGGACTGAAACTGACTTGATTGAAGATATTATCAAAGTTGTTTTGCAAAAGTTAAATCACAAGTACACATATGACTTTAGAGGCCTTTTCATATCTGATGAAAACTATACAAGCATTGAATCTTTATTGAAAATTGATTCAATGGAAGTTCGAGTCATTGGAATTTGGGGCAAAGGAGGTATTGGTAAAACAACTCTTGCTGCTGCTATTTTTCATAAAGTTTCTTTTCAGTATGAAGGCACTTGCTTCTTAGAAAATGTGGCAGAGGAATCAAAAAGGCATGGACTAAATTACGTATGCAACAAACTTTTTTCTAAGTTACTAAGGGAAGATATTAATATTGACACTAATAAAGTGATACCCTCTAATGTTCCAAAAAGACTCAGGCGTAAGAAAGTTTTCATCGTACTAGATGATGTGAACACTCCACAACTTCTAGAAAATTTGGTTGGAGCAGGTGCTGAGTGGCTAGGAGCTGGTAGCAGAGTCATTGTGACAACCAGAGATAGGCATGTACTTAAAAGTAGAGGTGTTGAAAAAATTCACGAAGTCAAGGAAATGAACTTTCATAACTCCCTTAAACTTTTCAGTTTAAATGCCTTTGGCAAAACCTATCCTACAGAGGAATATGAGGAGTTATCAAAAAGAGTAATGGTTTATGCCAAAGGAATCCCTTTAGCTTTGAAAGTTTTGGGATCATTTCTTCGTTCCAAAAGTGAAAATGAATGGGATAGTGCACTGACTAAATTAAAGAAGATTCCTAATCAGGAAATTCAGACAGTGTTGAGATTGAGCTATGATGGATTAGATGATGGAGACAAAAACATTTTTCTAGACATTGCTTGTTTTTTTAAGGGACAAAAAGGAGACAGTGTGACAAAAGTGTTAAATGCCTGCGGTTTTTCTGCAGATATAGGGATAAAAAATCTTTTAGACAAAGCTCTTATCACTACTACTACAGATATGCATGATTCTACTACAGATAGTTGCATAGATATGCACGATTTGATACAAGAAATGGGTAGAGGAATTGTTCGTGAAGAATCTATTGACAATCCTGGGCAGCGCAGTAGATTGTGGGATCCTGAAGAAGTCAATGATGTACTGACAAACAATACAGGAACTGGTGCAATCCAAGGAATATGGTTAGAAATGTCTCAAATTCAAGATATAAAGCTAAGCTCCAAATCATTCAGAAAGATGCCAAACTTGAGATTACTTGCTTTCCAATCCCTGAATGGAAACTTTAAAAGAATTAATTCAGTGTACCTTCCAAAGGGTCTTGAATTCTTACCTAAAAAATTACGATATTTGGGGTGGAATGGATGTCCATTAGAATCTCTACCATCGACTTTTTGCCCTGAGAAGCTTGTTGAGCTTTCCATGCGATACAGCAATGTGCAAAAACTTTGGCATGGAGTCCAGAATTTGCCAAATCTAGAGAAAATTGACCTTTTTGGCTGCATAAACCTAATGGAGTGTCCAAATCTGTCTCTTGCCCCAAAACTTAAACAAGTATCAATAAGCCACTGTGAAAGCTTGTCTTACGTTGATCCGTCAATTTTGTCCCTCCCGAAGCTAGAAATTTTAAATGTGAGTGGATGCACGTCGCTTAAGAGCCTTGGCAGCAATACTTGGTCACAATCTCTCCAACATTTGTATTTAGAAGGATCAGGTTTGAATGAACTGCCCCCATCAGTTTTGCATATAAAAGATCTAAAAATCTTTGCCTCTTCAATTAATTATGGTCTTATGGATCTTCCTGAAAACTTTTCCAATGATATTGTACTCTCTGCACCAAGGGAACATGATCGTGACACTTTCTTCACCTTACATAAGATACTGTATAGTTCTGGCTTCCAGTCAGTAACAGGTCTAACTTTTTACAATTGTCAAAGCTTGGGCGAAATCCCAGACAGCATCTCGCTGTTATCGTCATTGCTATTCTTAAGCTTCTTGCATAGCAACATCATAAGCTTACCCGAAAGCCTGAAGTATCTTCCAAGACTCCATCGTCTTTGTGTCGGTGAATGTAAAATGCTTCGACGTATACCTGCACTTCCACAGTCCATTCAGTGCTTCCTCGTCTGGAACTGCCAATCTCTTCAGACGGTGCTAAGTTCAACGATTGAACCATTGGAATCACCCAACGGCACTTTTCTGCTTGCTAACTGCATAAAATTGGATGAACATTCATTTGATGCAATAATTGGCGAACCACCACCATCAGAAGTATTAGAAGATGCATTCACGGATAATTATATTTATCAAACAGCAAAGCTTTGCTACTCTTTACCAGCTAGAAGTGGCAAAGTTCGAGAGTGGTTCCATTGCCACTTCACACAGTCTTTGGTCACTGTTGAAATTCCCCCTAATCTGTTGGGTTTCATTTTCTACTTGGTTGTTTCTCAAGTCAAATTATGCCACATTGGTTGCTGTGGAAGTATAGGATGTGAATGCTCTTTGGAAACCAGCCAGAATGAAAGGATCAGTATAACAAGTTTCGTTTTAGATAAAAATTCCATGCTTATTCATCCACTTCCATTTGAATTTATGACAGATCATGTGTTTGTATGGTATGATGGACGAATTTGCAAGCAGATAATGGAACTAGTTAAAGAGAGGAGAGCCATTAGCAGTGGTGATCCAAAGCTTAGATTTAAATTCTTCATTCAAACCCGACATAACCAGGAAGCAGTGAACATAAAAGAGTGTGGATTTCGTTGGATTTGTTCCTTTGAAGAAGGAGGATGCAAGCCCGAGAGAAGCAGGGAAATTCATGAAGTAGAAGCCAATGTGGTCACAAATAAAGTGGAGGGCTCTGAGTCTAATGAGCAAAAAGAAACTTCACACTTGAAAGCAGAAGAGACAGAAGACTTGAGTTATCGTCTTGAAGAAATCATGCATATTGGATTTGGAGGAGACCGCATGTAA	3414	0.3913	MAASNSAAVVGNASSSLSLSVTKKYDVFISFRGEDTRGDFTSHLHAALGRSSIETYIDYRIQKGEEVWVELVKAIKGSILFLVIFSENYANSSWCLNELVELMECRKQEEEVHVIPVFYKVDPSQVRKQTGSYRAAVANQKWKDALYEAANLSGFHSHTYRTETDLIEDIIKVVLQKLNHKYTYDFRGLFISDENYTSIESLLKIDSMEVRVIGIWGKGGIGKTTLAAAIFHKVSFQYEGTCFLENVAEESKRHGLNYVCNKLFSKLLREDINIDTNKVIPSNVPKRLRRKKVFIVLDDVNTPQLLENLVGAGAEWLGAGSRVIVTTRDRHVLKSRGVEKIHEVKEMNFHNSLKLFSLNAFGKTYPTEEYEELSKRVMVYAKGIPLALKVLGSFLRSKSENEWDSALTKLKKIPNQEIQTVLRLSYDGLDDGDKNIFLDIACFFKGQKGDSVTKVLNACGFSADIGIKNLLDKALITTTTDMHDSTTDSCIDMHDLIQEMGRGIVREESIDNPGQRSRLWDPEEVNDVLTNNTGTGAIQGIWLEMSQIQDIKLSSKSFRKMPNLRLLAFQSLNGNFKRINSVYLPKGLEFLPKKLRYLGWNGCPLESLPSTFCPEKLVELSMRYSNVQKLWHGVQNLPNLEKIDLFGCINLMECPNLSLAPKLKQVSISHCESLSYVDPSILSLPKLEILNVSGCTSLKSLGSNTWSQSLQHLYLEGSGLNELPPSVLHIKDLKIFASSINYGLMDLPENFSNDIVLSAPREHDRDTFFTLHKILYSSGFQSVTGLTFYNCQSLGEIPDSISLLSSLLFLSFLHSNIISLPESLKYLPRLHRLCVGECKMLRRIPALPQSIQCFLVWNCQSLQTVLSSTIEPLESPNGTFLLANCIKLDEHSFDAIIGEPPPSEVLEDAFTDNYIYQTAKLCYSLPARSGKVREWFHCHFTQSLVTVEIPPNLLGFIFYLVVSQVKLCHIGCCGSIGCECSLETSQNERISITSFVLDKNSMLIHPLPFEFMTDHVFVWYDGRICKQIMELVKERRAISSGDPKLRFKFFIQTRHNQEAVNIKECGFRWICSFEEGGCKPERSREIHEVEANVVTNKVEGSESNEQKETSHLKAEETEDLSYRLEEIMHIGFGGDRM*	1138

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso8g1595	1137	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	17	1109	-	-
	Gso8g1595	1137	Gene3D	-	21	185	IPR035897	-
	Gso8g1595	1137	Gene3D	-	347	430	IPR042197	-
	Gso8g1595	1137	PRINTS	Disease resistance protein signature	212	227	-	-
	Gso8g1595	1137	PRINTS	Disease resistance protein signature	287	301	-	-
	Gso8g1595	1137	PRINTS	Disease resistance protein signature	381	395	-	-
	Gso8g1595	1137	PRINTS	Disease resistance protein signature	682	698	-	-
	Gso8g1595	1137	SUPERFAMILY	Toll/Interleukin receptor TIR domain	19	155	IPR035897	-
	Gso8g1595	1137	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	1109	IPR044974	GO:0006952
	Gso8g1595	1137	Pfam	TIR domain	24	184	IPR000157	GO:0007165
	Gso8g1595	1137	Pfam	NB-ARC domain	199	418	IPR002182	GO:0043531
	Gso8g1595	1137	SMART	till_3	24	152	IPR000157	GO:0007165
	Gso8g1595	1137	Pfam	Leucine Rich Repeat	616	635	IPR011713	-
	Gso8g1595	1137	Gene3D	Ribonuclease Inhibitor	529	707	IPR032675	-
	Gso8g1595	1137	Gene3D	Ribonuclease Inhibitor	708	888	IPR032675	-
	Gso8g1595	1137	SUPERFAMILY	L domain-like	493	870	-	-
	Gso8g1595	1137	ProSiteProfiles	TIR domain profile.	23	178	IPR000157	GO:0007165
	Gso8g1595	1137	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	178	440	IPR027417	-
	Gso8g1595	1137	Gene3D	-	187	342	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g1595	Gso-Chr8	15600912	15606774	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g1595	19	833	WRKY Transcription Factor Family	AT4G12020	33.414	5.34e-111	380

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso8g1595	-		-	gmx:100809954	2210.65