Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1593 ATGCAGCCGAAATCTCACACCCCTTTTTTTGTCCCTCCCCAAAAAGCCATGAACAACAATAACCCTAACAACAACAGTAACAGAATCTCATCACCAAGAAATGGCAACAGCACTACCCAGGCTTGTGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCCGATTGCATTCTTGCACCTTACTTCCCTCACGAACGCCAACGCCAGTTCCTCAACGCGCACAAGTTGTTTGGCGTGAGCAACATCACCAAGATCATCAAGCTTCTCAGCCCTCAGGACAAGGACCAAGCCATGCGTACCATCATTTACCAATCCGACATGCGCGCTACAGATCCAGTTGGTGGTTGCTATAGGTACATTCTCGATCTCCAGGCCCAGATCGAGTACTATAGGGCGGAACTCGAACTCGTCCTTCAACAACTCGCCATTTTTAGAGCTCAGGCTCAACAACAACAACAACAACAACATGGTATCTATGCTCCAAACAACGTTAATATCGCTGTCAATGGCGATGGCGAGGTTTTGAATGCTGATCCAATGGGATTGTACGACCAGCAACAACATTATCAGTGTCTTCAGCCACAACAACAGGAGCAGTATGCTATGATGCATGAAAATGGTCATGGAAGCCAAAACAGCGACGGCACTGCTTTCCAGGAACAAATAAACACGTGGGCTGTGCAGAACACTGCTGTGTCTCTTTCTTCGTTGTCGTTGCAAGGGCAGGGTAGTAATGTTAGCGATGGGTATGATCACAAGCCGGTGCTGGGGATTGACATGGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAAGCAGTTTTATTTAAGATAGACGATGCAGTAATTAAAGCGGAGGCTGATCAGTGCATGCAACAAGCTCAAGACCATGACCTGAAAGGTGCAGCAACATCGTTTACTCTCACAAATTGTACTTGCTGA 969 0.4706 MQPKSHTPFFVPPQKAMNNNNPNNNSNRISSPRNGNSTTQACAACKYQRRKCAPDCILAPYFPHERQRQFLNAHKLFGVSNITKIIKLLSPQDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYYRAELELVLQQLAIFRAQAQQQQQQQHGIYAPNNVNIAVNGDGEVLNADPMGLYDQQQHYQCLQPQQQEQYAMMHENGHGSQNSDGTAFQEQINTWAVQNTAVSLSSLSLQGQGSNVSDGYDHKPVLGIDMDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEADQCMQQAQDHDLKGAATSFTLTNCTC* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1593 322 MobiDBLite consensus disorder prediction 1 35 - -
Gso8g1593 322 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 35 242 - -
Gso8g1593 322 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Gso8g1593 322 Coils Coil 134 154 - -
Gso8g1593 322 MobiDBLite consensus disorder prediction 12 35 - -
Gso8g1593 322 Pfam Lateral organ boundaries (LOB) domain 41 136 IPR004883 -
Gso8g1593 322 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1593 Gso-Chr8 15581881 15584746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1593 40 158 AS2 family AT3G13850 73.109 2.15e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso8g1593 LOB 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1593 - - gmx:100786728 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0081 7 703420 705420 Gso8g1593 8 15581881 15584746 GST
Gso11g3592 11 51628579 51629434 Gso8g1593 8 15581881 15584746 PCT
Gso8g1593 8 15581881 15584746 Gso11g3592 11 51628579 51629434 PCT