Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1584 ATGGGTGGTTCAGGAAGATGGCTTAAGTCGCTCATTTCTCTCAGAAGGCCCTCCCCAACTGATCAAGAGAAGGGTGGTGGCAAGAGTAAGAGACAGTGGAAGCTATGGAAGAGCACTTCAGAAGGGTTTGGGATTGGATCATCAATGCATAAGGGGCAAGGTGGTGGTGGTTCCTTTGTGGTAGATGGTGGAGCATTTGCTGCTGCTTTGGCTGCTGTGGTCAGAACTCCACTCAAAGACTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGTATCCAGGCAGTGTTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAAGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTTGGGAACTCTCAAGAAGGGAAATATGCACGGTGCAATGAAGCTGATCCTGTTAAGCAAGCTGAGCAAGGGTGGTGTGACATTCCAAGAACTGCGGAAGAGGCAAAATTACAAATGAGGCAGGAAGGAGCAATTAAGAGGGATAGAACAAAGGCATATTCTCAGTCTAAGAAGAAATTGACAGCGAGTCCAAACTCAAGAGCTTCTAAGTCAGTGATTCCTCTCAAGAACCGCAAGCTAGACAGAAAGAGCTCGGGATGGAACATGCTAGATCGCTGGATGGCTGCAAAGCCATGGGAGAGCAGGTCAATGGTAGAGATGTATTTGGACTCACCTGTCATGACTCCAGTGACCAGTAAAAGTGATCATCTTGTTCTTCCCTTTAATTCGAATCAACAAATTGGCACGGTCAAAGCAAGAAGGAATGGTGTGACAACTAGGATTTCAACTAAATCTCTTACAACTAGTCAATCAACTCCATCATCTTCAGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTATGTCAACTTCATGCACATCTGGATCCCCAGCTCGACCATCTAACAACAATGTTACAGTGGAACCAACAGAGGAAACAAATGCTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAACTGAAACCCTGTAGGTGTTTTTCTCAGAATTCAAAGACAATCTTTATGGATGATTGTGTGTCACTAAGTGGAGTTACTAGAAGCAGTTCTGGTTCCTACCCTTCTGCTAATACATGGAAGAATCTCTATGCAACACCTCTAAGAACAAGTTATCAAAGACAATAG 1266 0.4534 MGGSGRWLKSLISLRRPSPTDQEKGGGKSKRQWKLWKSTSEGFGIGSSMHKGQGGGGSFVVDGGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALKAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGNSQEGKYARCNEADPVKQAEQGWCDIPRTAEEAKLQMRQEGAIKRDRTKAYSQSKKKLTASPNSRASKSVIPLKNRKLDRKSSGWNMLDRWMAAKPWESRSMVEMYLDSPVMTPVTSKSDHLVLPFNSNQQIGTVKARRNGVTTRISTKSLTTSQSTPSSSAISSECMYDDSPMSTSCTSGSPARPSNNNVTVEPTEETNACKPSYMNLTASTKAKLKPCRCFSQNSKTIFMDDCVSLSGVTRSSSGSYPSANTWKNLYATPLRTSYQRQ* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1584 421 MobiDBLite consensus disorder prediction 205 221 - -
Gso8g1584 421 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Gso8g1584 421 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Gso8g1584 421 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 420 - -
Gso8g1584 421 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Gso8g1584 421 SMART iq_5 85 107 IPR000048 GO:0005515
Gso8g1584 421 SMART iq_5 108 129 IPR000048 GO:0005515
Gso8g1584 421 MobiDBLite consensus disorder prediction 188 204 - -
Gso8g1584 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 128 IPR027417 -
Gso8g1584 421 MobiDBLite consensus disorder prediction 325 348 - -
Gso8g1584 421 MobiDBLite consensus disorder prediction 188 221 - -
Gso8g1584 421 Gene3D - 83 137 - -
Gso8g1584 421 PANTHER IQ-DOMAIN 5-RELATED 1 420 - -
Gso8g1584 421 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1584 Gso-Chr8 15476603 15479518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1584 1 410 IQD Protein Family AT1G72670 44.289 2.03e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1584 - - gmx:100806397 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0070 7 613253 616194 Gso8g1584 8 15476603 15479518 GST
Gso15g0226 15 2062091 2064793 Gso8g1584 8 15476603 15479518 PCT
Gso11g3582 11 51546036 51549203 Gso8g1584 8 15476603 15479518 PCT