Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1528 ATGTATGCTATGAAGATCATGAATGATCATTCCAAAGATACTCCACTTTGGCCTAATGGACCAGCTGATAAACCGGTGTTGTGTAACGCTTGTGGATCAAGATACAAGACAAGAGGACACCTTGACAATTATCTTCCCAAGAATGTCCATCCTCAGCCACACCACAAGAAATTTAAAAATGTAAATAGCGGAGGAAGTAATCTCAATGTTGAGCCTGAGCTTGAGTCCGGCAACCAACTTTTAAACCATGTTTCGCCTAGATCTACAACTAATGGTGACAGCGACAAGTTAACCTTAGATGTCCATCATATATCACCACAAGATTTTGGGAAGAAGATCCCATCAAAGAAACGGTCACCGATGGTGTACAAGCGTATGATACCAATGGAGAAGTTTCAAAAGCAGCTTGTTAAGTTGTATAAAAGTGAAAGACAACCAGAAGAGAGTGTTTTGGTGGATAACATGATGAACTTCATACCCGAAAATGAGATAGGACTTGGAACCATTCTTCTTAAGACAAATGATGATGATGCTTCTTCTACAGATAAATGTGGATCATCCACATCTGCACCCTGA 576 0.401 MYAMKIMNDHSKDTPLWPNGPADKPVLCNACGSRYKTRGHLDNYLPKNVHPQPHHKKFKNVNSGGSNLNVEPELESGNQLLNHVSPRSTTNGDSDKLTLDVHHISPQDFGKKIPSKKRSPMVYKRMIPMEKFQKQLVKLYKSERQPEESVLVDNMMNFIPENEIGLGTILLKTNDDDASSTDKCGSSTSAP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1528 191 Pfam GATA zinc finger 11 40 IPR000679 GO:0006355|GO:0043565
Gso8g1528 191 PANTHER OSJNBB0038F03.10 PROTEIN 13 188 IPR044589 -
Gso8g1528 191 CDD ZnF_GATA 10 40 IPR000679 GO:0006355|GO:0043565
Gso8g1528 191 Gene3D - 7 64 IPR013088 GO:0006355|GO:0008270
Gso8g1528 191 PANTHER OSJNBB0038F03.10 PROTEIN 13 188 - -
Gso8g1528 191 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 11 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1528 Gso-Chr8 14888153 14896503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1528 13 172 C2C2-Gata Transcription Factor Family AT4G17570 26.471 3.28e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gso8g1528 GATA 3e-08 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1528 - - gsj:114423936 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1082 5 33954803 33958498 Gso8g1528 8 14888153 14896503 PCT
Gso8g0680 8 6227239 6231253 Gso8g1528 8 14888153 14896503 PCT
Gso8g1528 8 14888153 14896503 Gso5g1447 5 37954227 37958082 PCT