Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1526 ATGCCAAAATCCAAGAGAAATAGACAAGTTACGCTTTCAAAGACGAAGAAAAAGGGAAGAGACCACAAAGAGACGATAGTGAACGGAATAAAAGATGCTGCAGAAAAGTACGGGCACGTGTACGTGTTCTCTTTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTCAGGGACCAGTTGAAATCGAGTAGCAGGTTCTTTCTCGGCTCTAACAAAGTAATGCAAGTTGCTTTAGGTCGCTCTGCTTCGGATGAGATCAGACCCGGCCTTCATAAGGTTTCAAAGCTATTGCGTGGAGATTCTGGGATGGTTTTCACCAATTTGTCAAAGGAAGAAGTTGAAAGGCTGTTTAAAGAATTTGAGGAGTATGACTTTGCAAGAACAGGAAGCAATGCCACTGAAAAGGTGGATCTCAAAGAGGGTCCATTAGAGCAATTCACCCATGAGATGGAACCTTTTCTCAGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCGGATTTTGTTGTTTGTGAGGAAGGAAAGCCTTTGTCACCCGAGGCTTCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACATTTCGACTTAGCTTAATTTGCAGATGGAGTCCCGATGAGTTTGAACTTTACATCGATGGACCAGATGAATCAGATATCGAATGCTCGTAG 690 0.4304 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGHVYVFSFENMRNQKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMVFTNLSKEEVERLFKEFEEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLMGIKMATFRLSLICRWSPDEFELYIDGPDESDIECS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1526 229 Gene3D - 125 198 IPR043164 -
Gso8g1526 229 SUPERFAMILY Ribosomal protein L10-like 20 143 IPR043141 -
Gso8g1526 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Gso8g1526 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 228 - -
Gso8g1526 229 MobiDBLite consensus disorder prediction 1 16 - -
Gso8g1526 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Gso8g1526 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 228 - -
Gso8g1526 229 MobiDBLite consensus disorder prediction 1 22 - -
Gso8g1526 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Gso8g1526 229 Gene3D - 30 211 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1526 Gso-Chr8 14877599 14880186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1526 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.809 3.96e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1526 K14815 - gmx:100305462 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1526 8 14877599 14880186 Gso8g1526 8 14877599 14880186 ECH