Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1520 ATGGCATCGTCCAAGGTAGCGACGACGACGACGACGACGACGAATTCGGATATTTCGAGCCAGCAGGTATGGGACGGCGCCACCATGGAGATGGAGTCTCAAGACAACATGAACATGAGCATGAGCCTCCAGGATTTGTTGACCGAAAACGACGCCGTGCCACCCTCTCATAGTCATGGAAGGGGAAAGAGAAAAACCCTAGTGGAGGAACCCCTCGTCGTCGATAAGGTCACTCTTCAGAAACAGAGAAGGATGATAAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGCAAGCAGGCTTACACAGTTGAGCTAGAATCTTTGGTTACACATCTCGAGGAAGAGAATGCCATCTTGTTAAAACAAGAGGCCGATAGGAAAAGGCAGAGGTTCAATCAGCTCATGGAGTGCCTTATTCCAGTTGAGGAAAAACGTAAACCAAAACCAATGCTTCGGAGAGTGAATTCATCCCAATGGTGA 483 0.4886 MASSKVATTTTTTTNSDISSQQVWDGATMEMESQDNMNMSMSLQDLLTENDAVPPSHSHGRGKRKTLVEEPLVVDKVTLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAILLKQEADRKRQRFNQLMECLIPVEEKRKPKPMLRRVNSSQW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1520 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Gso8g1520 160 SMART brlzneu 76 138 IPR004827 GO:0003700|GO:0006355
Gso8g1520 160 PANTHER OS05G0437700 PROTEIN 35 159 - -
Gso8g1520 160 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g1520 160 Gene3D - 79 134 - -
Gso8g1520 160 Pfam bZIP transcription factor 78 127 IPR004827 GO:0003700|GO:0006355
Gso8g1520 160 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 159 IPR043452 GO:0003700|GO:0045893
Gso8g1520 160 CDD bZIP_plant_BZIP46 80 123 - -
Gso8g1520 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 130 IPR004827 GO:0003700|GO:0006355
Gso8g1520 160 SUPERFAMILY Leucine zipper domain 80 130 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1520 Gso-Chr8 14827175 14829322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1520 61 160 bZIP Transcription Factor Family AT5G44080 58.824 7.61e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso8g1520 bZIP_1 1.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1520 K14432 - gmx:100101878 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1520 8 14827175 14829322 Gso8g1520 8 14827175 14829322 ECH
Gso15g0423 15 3857029 3858678 Gso8g1520 8 14827175 14829322 GST