Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1516 ATGGTAGAAATGAAGGGCATATGTAATGTGTTGCATGGGTTGAAACCAGTGTTGCTGATGGTGTTAGTGCAAATTGCATATACTGCTGTCAATGTGCTTTTCAAGCTCGCCATAAACGACGGAATGAGTGTAAAGGTTGCCACAGCATATCGCCTCACTTTTGGATCTGCTTTCACTGTTCCTCTCGCTCTCATTTCTGAAAGGAACAAAAGACCAAAGATGACTTGGAGGGTGCTTTTCATGGCATGTCTTTGTGGCTTATTCGGGGGAAGTTTATTTCAAAACCTTTTCTATGAGTCCTTGGCTTTAACATCAGCAACGTTTGCGTCCGCTCTCTACAACCTCATTCCAGCCATTACCTTTGTCTTGGCCATCTCCTGCGGTTTCGAAAGGTTAAATTTGAGGGTGGCAGCAGGAAGGGCCAAGGTGTTGGGAACTTTACTTGGAATTGGTGGAGCAATGTTGTTGACCTTTATCAAAGGGGCAGAAATTAATATCTGGCCTTTCCACATCAACCTTATGCATCCAGATCAGCACCAAAACAGCCACGTGGCATCATTAAATACTGACTCTGGCAATAATAAGTTGTTGGGAGCAATTTGCTCCCTAGCAAGCTGCTTCTCTTTTGCTTTGTGGCTCACCATTCAGGCTAAGATGAGCAAAGAATACCCATGTCACTACTCAAGCACGGCTCTTATGTCTACAGCGGGAGCAATACAAGCCACTGCTTTTGGTTTCTGTTTTGAGAGGGATTTGACCCAATGGAAGTTGGGTTGGAATATTCGGCTACTGGCTGTGGCTTATTCGGGAATCGTGGCCTCTGGAATAGTTGTAATTATAACTGCGTGGTGCATACAGATGAGAGGGCCTCTGTTTGCGTCTGTTTTCAACCCTCTAATGCTTGTGCTTGTGGCTATTGCCGGTTCTTTGATGTTGAATGAGAACTTATACGTAGGAAGTGTGGTTGGAGCAGTGCTGATTGTGTGTGGGCTGTACATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAATATTACTCAGTTAGTACCATCAGAAACCATCCGAGAAGCTGAAGCCATAGAAGTTGTTGTCATGTCCATTTCCACACCAATAGATTATGAAAAATGTGACCAAAACAACCAAGGCGAAAGGAATGTTGACAAAGAAGATTGTGACGATTTGACAAAAAACAAGGAAGAAGATGATATTGGCATATAG 1218 0.4351 MVEMKGICNVLHGLKPVLLMVLVQIAYTAVNVLFKLAINDGMSVKVATAYRLTFGSAFTVPLALISERNKRPKMTWRVLFMACLCGLFGGSLFQNLFYESLALTSATFASALYNLIPAITFVLAISCGFERLNLRVAAGRAKVLGTLLGIGGAMLLTFIKGAEINIWPFHINLMHPDQHQNSHVASLNTDSGNNKLLGAICSLASCFSFALWLTIQAKMSKEYPCHYSSTALMSTAGAIQATAFGFCFERDLTQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAIAGSLMLNENLYVGSVVGAVLIVCGLYMVLWGKSKEMKNITQLVPSETIREAEAIEVVVMSISTPIDYEKCDQNNQGERNVDKEDCDDLTKNKEEDDIGI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1516 405 PANTHER WAT1-RELATED PROTEIN 14 372 - -
Gso8g1516 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 340 - -
Gso8g1516 405 PANTHER WAT1-RELATED PROTEIN 14 372 IPR030184 GO:0016021|GO:0022857
Gso8g1516 405 MobiDBLite consensus disorder prediction 376 405 - -
Gso8g1516 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Gso8g1516 405 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020|GO:0016021
Gso8g1516 405 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Gso8g1516 405 MobiDBLite consensus disorder prediction 377 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1516 Gso-Chr8 14773647 14776364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1516 4 362 Nodulin-like Gene Family AT1G68170 43.333 1.38e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1516 - - gmx:100798755 788.104