Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1515 ATGGATATGTGTAACGTAGTGCATGCGTTAAAGCCCATTCTGCTAATGGTGCTGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTCGCGCTTAACGATGGCATGAACTTGAGTATCATTGTTGCTTACCGTTATGTTTTTGCAACTGCTTTCATTGCTCCACTTGCTTTCATTGTTGAAAGGAAAACGAGGACAAAGATGACTTGGACGATACTGTTTCAGGCATTTCTGTGCGGCTTAATTGGTGGAGCATTGCCTCAAAACTTAAACATGGAAGCGATTGCTTTAACTTCAGTAACGTTTACAACAGCCATATCCAACCTCATTCCAGCCATCACTTTTATCATATCCCTCTCCTTCGGATTGGAGAGATTAAATTTAAGAAGAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATTAGTGGGGCAATGCTACTGACATTCATTAAAGGCCCAGAAGTTAAGATGCTGTCTTTCCATGTAAACCTTTTCAACCACCGAAACGGCCATGTCGTACATCCACACGCTACTTCTGGCCTTATGACCATATTTGGTGCTCTCGCTTCTGTCGCAAGCAACGTCTCTTATGCCATGTGGCTTATCATTCAGGCAAAGATGAGTGAAAGATACCCGTGTCCTTATTCGAGCACAGCGTTGATGTCCCTAATGGGGGCAGTGTTATCCATTTCGTTTGCTTTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATATCAGACTATTGACTGTGGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTAGCCGTGATTTCGTGGTGTGTACGCACGAGAGGTCCACTGTTTGTCTCCATTTTTAGCCCTCTAATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAACTATACCTTGGAAGCATCATTGGATCAATGTTGATTATTTGCGGATTATACGTGGTTCTTTGGGGTAAGAGCAAAGAGATGAAGAAGAATCAATCTGGTCAGTCAGAAAGCACCCATAAATCTGACACAATTGAAATAATGGTCAAACCTCGTGTAGAAGATAAAAGCAACAATAAGAGCAATACCCTCATTAACTCTGTAAATGTGACGGGGGATAATAAAGATTCATGGAAAAATGGACGTGAAAGCAATGTATCACATATACACTGCTGCAAGGTGCAAGAAGAAGTAACATCTCAGAATGTCTCACGTACCTAA 1242 0.4267 MDMCNVVHALKPILLMVLVQVANAWVNVLYKLALNDGMNLSIIVAYRYVFATAFIAPLAFIVERKTRTKMTWTILFQAFLCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPAITFIISLSFGLERLNLRRAGGKAKIIGTITGISGAMLLTFIKGPEVKMLSFHVNLFNHRNGHVVHPHATSGLMTIFGALASVASNVSYAMWLIIQAKMSERYPCPYSSTALMSLMGAVLSISFAFCVERDLSQWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRTRGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSMLIICGLYVVLWGKSKEMKKNQSGQSESTHKSDTIEIMVKPRVEDKSNNKSNTLINSVNVTGDNKDSWKNGRESNVSHIHCCKVQEEVTSQNVSRT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1515 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 333 - -
Gso8g1515 413 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Gso8g1515 413 Pfam EamA-like transporter family 11 153 IPR000620 GO:0016020|GO:0016021
Gso8g1515 413 PANTHER WAT1-RELATED PROTEIN 11 365 IPR030184 GO:0016021|GO:0022857
Gso8g1515 413 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Gso8g1515 413 PANTHER WAT1-RELATED PROTEIN 11 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1515 Gso-Chr8 14746224 14751908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1515 3 354 Nodulin-like Gene Family AT1G68170 44.915 3.55e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1515 - - gmx:100788378 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1515 8 14746224 14751908 Gso5g1037 5 33403373 33407551 PCT
Gso8g1515 8 14746224 14751908 Gso8g0637 8 5870477 5879859 PCT