Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1506 ATGGTTGTTGACGCTTTGAATGAGGATTTGAGAATCAACGGAGCAGTTGAACCGTTGCCTGAGGACTTTGATGCAACAGCTGTAATCATAGATCCCGTGCCTTTGGCAGTTGTAGACAATGGCATTGTCAAGGAGGAGGCGCAGATCATTAAAGGAAAAGAGAAAAGAGAAATAGTACTGGGAAGAAATATTCATACCTCGTGTCTAGAAGTCACAGAGCCCGAGGCAGATGATGAGGTCACTGGGGACCGGGAAGCTCATATGGCAAGTGTGTTGGCCAGATACAAAAGAGCTTTGACTGAAAGGACAAAGCATCATTTAGGGTACCCCTATAATTTGGATTTCGATTATGGTGCGCTCACGCAACTTCAGCACTTTTCCATAAACAACCTTGGAGATCCATTTATTGAAAGCAACTATGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCCGATTGTGGGAACTGGAGAAAAATGAGTACTGGGGCTATATAACAAACTGTGGTACAGAAGGCAATCTCCATGGCATCCTAGTTGGGAGAGAGGTCTTTCCAGATGGGATTTTGTATGCTTCACGGGAGTCACATTATTCTGTGTTTAAAGCTGCTCGAATGTACAGAATGGAATGTGAGAAGGTTGATACTCTTTGGTCTGGGGAAATTGATTGTGATGATTTCAAGGCCAAGCTTCTTAGTCACCAGGATAAGCCAGCAATTATAAATGTGAACATAGGTACAACTGTGAAAGGGGCTGTGGATGATCTTGATCTGGTCATAAAAAAACTTGAAGAAGCTGGATTTTCGCATGACAGATTCTACATCCATTGTGATGGGGCTTTGTTTGGTCTCATGATGCCTTTCGTGAAACGAGCTCCAAAAGTTACTTTTAAGAAGCCTGTTGGCAGTGTTAGTGTTTCTGGCCACAAATTTGTAGGGTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGAATATGTAAATGCTCTTGCCAGGGATGTGGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTCTGGTATACCTTGAATCGGAAAGGATATAGAGGTTTTCAGAAAGAAGTACAGAAATGCTTGCGAAATGCACACTACTTCAAAGGCCGCCTTGTTGAGGCTGGGATTGGTGCAATGCTTAATGAACTGAGCAGCACGGTTGTGTTTGAGAGGCCACATGATGAGGAATTTATACGCAAGTGGCAGTTAGCATGCAAGGGGAATATCGCACATGTGGTGGTGATGCCAAACATCACTATTGAGAAGCTTGATGATTTTCTGAACGAGCTTCTGGAGAAGCGTGCTACCTGGTTTCAAGATGGCAAGGATCAACCCTACTGTATATCATCAGACGTAGGTGAAAAGAATTGCCTTTGTGCTTTGCACAAGTAA 1452 0.4408 MVVDALNEDLRINGAVEPLPEDFDATAVIIDPVPLAVVDNGIVKEEAQIIKGKEKREIVLGRNIHTSCLEVTEPEADDEVTGDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALTQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECEKVDTLWSGEIDCDDFKAKLLSHQDKPAIINVNIGTTVKGAVDDLDLVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPVGSVSVSGHKFVGCPMPCGVQITRLEYVNALARDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKGRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNITIEKLDDFLNELLEKRATWFQDGKDQPYCISSDVGEKNCLCALHK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1506 483 Gene3D - 121 365 IPR015421 GO:0003824
Gso8g1506 483 PANTHER SERINE DECARBOXYLASE 3 483 - -
Gso8g1506 483 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 307 328 IPR021115 GO:0016831
Gso8g1506 483 PANTHER - 3 483 - -
Gso8g1506 483 Pfam Pyridoxal-dependent decarboxylase conserved domain 193 402 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gso8g1506 483 Gene3D Aspartate Aminotransferase, domain 1 366 454 IPR015422 GO:0003824
Gso8g1506 483 SUPERFAMILY PLP-dependent transferases 103 453 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1506 Gso-Chr8 14673477 14677851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1506 K25193 - gmx:100795577 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0435 15 3977004 3981226 Gso8g1506 8 14673477 14677851 GST
Gso8g0635 8 5860894 5864145 Gso8g1506 8 14673477 14677851 PCT
Gso8g1506 8 14673477 14677851 Gso8g0635 8 5860894 5864145 PCT