Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1494 ATGAGTCAGCATGTTAGTGACGAGGTTGTGGCAAAGGACATGGGGGAAATAAGAAGTGGGCCTTCTTCACGTAGGCATGGAGATACTTTGCCACATATTCACAAGGTGGGAACTCCTCCAAAGCAGACACTTTTCCAAGAGATCAAACATTCTGTGGTAGACACTTTCTTCCCAGACAAACCCTTTGAACAATTTAAGGACCAAACCGGCGGTAGAAAGTTTCTCTTAGGCCTGCAATCTCTCTTCCCCCTTTTTGAATGGGGAAGAGATTACAATCTTAAAAAATTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTATGTATCCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGAACCCCAATATGCACTATACACCAGCTTTGTGTGTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATCGGGCCCGTAGCTGTGGTGTCCCTCTTGCTTGGGACTATGCTAACCGATGAGATCAGTGACTTCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCTACCTTCTTCGCAGGAGTCACTCAAATGGCACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCGATTACTATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATAAAAGCGTTCACCAAGAAAACTGATATTGTTTCTGTCCTGCGCTCGGTTTTCAATGAAGCACACCACGGGTGGAATTGGGAAACAATAGTCATTGGAGTAGCATTCTTGGTTTTCCTTCTTATAACCAAGTATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCTATGATCTCTGTTATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGCGTGGCAATTGTGAGACATGTTAAGAAGGGTGTGAATCCATCATCTGCTAGTGAGATTTTTTTCAGTGGAAAATATCTAGGCCCTGGTATTCGGGTTGGTGTGGTAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGATGGCAATGGGAACAATGAACATTATTGGTTCACTAACATCTTGTTATGTGGCTACAGGATCTTTTTCTCGCTCAGCAGTGAACTACATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATTGTTGTGTTATTAACACTGCTACTCATTACTCCACTCTTTAAGTACACTCCAAATGCGGTTCTTGCATCTATTATAATAGCAGCGGTGCTTGGCCTTGTGAACATTGAAGCAGTTATTCTGCTGTGGAAGATTGACAAATTCGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGCGTGATCTTCATAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCTATATCTTTTGCCAAAATCCTCTTACAAGTGACAAGGCCAAGAACTGCAGTACTAGGAAAACTTCCAGGGACTACTGTTTATAGGAACATCCTGCAATACCCCAAAGCAACCCAAATTAATGGCATGCTGATTATAAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGGCCGATGAAGCCGCCCAAAGGACAAATGGATCGTCAAGAATAGAGTATGCCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCTTTTGAAGAGTTATACAAGACCCTTCAGAAAAGAAAAATACAGCTTATCTTGGCAAACCCCGGGCCAATTGTAATGGAGAAGCTCCACGCATCAAAGTTAGCAGACTTAATTGGGGAAGATAAAATATTTCTAACAGTGGCTGATGCAGTTTCTACTTTTGGTCCAAAGGGTGAAGCAGTAGTATGA 1974 0.425 MSQHVSDEVVAKDMGEIRSGPSSRRHGDTLPHIHKVGTPPKQTLFQEIKHSVVDTFFPDKPFEQFKDQTGGRKFLLGLQSLFPLFEWGRDYNLKKFRGDFISGLTIASLCIPQDIAYAKLANLEPQYALYTSFVCPLVYAFMGSSRDIAIGPVAVVSLLLGTMLTDEISDFKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKAFTKKTDIVSVLRSVFNEAHHGWNWETIVIGVAFLVFLLITKYIAKKNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVRHVKKGVNPSSASEIFFSGKYLGPGIRVGVVAGMVALTEAVAIGRTFAAMKDYSLDGNKEMMAMGTMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAVILLWKIDKFDFVACMGAFFGVIFISVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNILQYPKATQINGMLIIRVDSAIYFSNSNYIKERILRWLADEAAQRTNGSSRIEYAIVEMSPVTDIDTSGIHAFEELYKTLQKRKIQLILANPGPIVMEKLHASKLADLIGEDKIFLTVADAVSTFGPKGEAVV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1494 657 MobiDBLite consensus disorder prediction 9 32 - -
Gso8g1494 657 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Gso8g1494 657 ProSiteProfiles STAS domain profile. 527 649 IPR002645 -
Gso8g1494 657 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 656 - -
Gso8g1494 657 PANTHER SULFATE TRANSPORTER 18 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso8g1494 657 Gene3D STAS domain 507 650 IPR036513 -
Gso8g1494 657 CDD STAS_SulP_like_sulfate_transporter 528 642 - -
Gso8g1494 657 MobiDBLite consensus disorder prediction 1 33 - -
Gso8g1494 657 Pfam STAS domain 528 645 IPR002645 -
Gso8g1494 657 SUPERFAMILY SpoIIaa-like 529 650 IPR036513 -
Gso8g1494 657 TIGRFAM sulP: sulfate permease 83 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1494 Gso-Chr8 14535024 14540231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1494 13 652 Inorganic Solute Cotransporters AT1G22150 72.136 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1494 K17470 - gmx:100784124 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1494 8 14535024 14540231 Gso8g1494 8 14535024 14540231 ECH
Gso15g0447 15 4077301 4090134 Gso8g1494 8 14535024 14540231 GST