Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1493 ATGGATGCTTTAACCTTAAGCTCAAGTGTGAACATTTCCAAACCATTTCATATCCTTGCACTCTCAAAGAAGCAGCAAAGAGAAAGACATCCTCGTACGCAGTTTGGTGTTTCATGCAGAGGCAGAAAAGAGCTTGGAGGTGGTGTGGAGGACAACTTGTACAAGGTACTAAGCTTGAGTCCCAAAAGTGCAACCACGGATGACATAAAGAAAGCATACAGATCAATGGCGCTTCGGTACCACCCTGATGTGTGCCAGGATTGTTCCAAGAAGGAGGAATCAACGAGGATGTTTGTGCAACTCAACGCAGCTTACCAGACCTTATCGAATCCTAGGCTTCGAGCAGAGTATGACTGTGAATTGGGTTTGAGAAGTGAAAAGATCAGTGTTGGTGATGAGACTTGGAGATATATATGGCAGAATCAACTTGCTGAGTTGAAGAGAAGGTCTCACATACGTATGGCACAAAACCAAGGATCATGGGGCAGTAGAATCAGACCGCAAAACATCAATTGA 516 0.4438 MDALTLSSSVNISKPFHILALSKKQQRERHPRTQFGVSCRGRKELGGGVEDNLYKVLSLSPKSATTDDIKKAYRSMALRYHPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRLRAEYDCELGLRSEKISVGDETWRYIWQNQLAELKRRSHIRMAQNQGSWGSRIRPQNIN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1493 171 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gso8g1493 171 PRINTS DnaJ domain signature 55 73 IPR001623 -
Gso8g1493 171 PRINTS DnaJ domain signature 73 88 IPR001623 -
Gso8g1493 171 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gso8g1493 171 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 170 - -
Gso8g1493 171 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Gso8g1493 171 SMART dnaj_3 51 113 IPR001623 -
Gso8g1493 171 SUPERFAMILY Chaperone J-domain 50 117 IPR036869 -
Gso8g1493 171 Gene3D DnaJ domain 47 145 IPR036869 -
Gso8g1493 171 CDD DnaJ 52 110 IPR001623 -
Gso8g1493 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 170 - -
Gso8g1493 171 Pfam DnaJ domain 52 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1493 Gso-Chr8 14519865 14532812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1493 54 118 C2H2 Transcription Factor Family AT1G74250 40.299 8.59e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1493 - - gmx:100783590 348.977