Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1492 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAAGTTGGTGCTGCTGCTGTTACTGTTAGTCCTAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTCAGAGGTGGTGGCAACCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGCTTTGACCCACTAGGCCTTGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTGATTCATGGGAGATGGGCAATGGCTGCAGTTCTAGGAATCTTTGTGGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAAGCTGGAGCTGACCCAAATGCAATTGCTCCTTTCTCCTTTGGTACTCTTCTGGGAACCCAGTTGATTCTCATGGGGTGGGTTGAAAGCAAGAGATGGGTGGACTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACATCTGAGAACTTTGCCAATGCCACTGGTGAGCAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGAGCTTGGCCGGCACTATCAAGGATGGAGTTTACATTCCGGATACCGAGAAGCTCGAAAGATTGAAATTGGCTGAGATAAAGCATGCCAGGATTGCTATGTTGGCCATGCTGATTTTCTACTTTGAGGCTGGTCAAGGGAAGACCCCCCTTGGTGCTCTCGGCTTGTAA 786 0.5089 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1492 261 Gene3D Chlorophyll a/b binding protein domain 73 260 - -
Gso8g1492 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 261 IPR001344 GO:0009765|GO:0016020
Gso8g1492 261 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 261 - -
Gso8g1492 261 SUPERFAMILY Chlorophyll a-b binding protein 70 261 - -
Gso8g1492 261 Pfam Chlorophyll A-B binding protein 73 249 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1492 Gso-Chr8 14513294 14515151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1492 1 261 Chloroplast and Mitochondria Gene Families AT1G15820 81.298 1.14e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1492 K08917 - gmx:100500118 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0450 15 4129214 4130634 Gso8g1492 8 14513294 14515151 GST
Gso8g0613 8 5689546 5690876 Gso8g1492 8 14513294 14515151 PCT
Gso8g1492 8 14513294 14515151 Gso8g0613 8 5689546 5690876 PCT