Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1484 ATGTCTTCTTCTCTTTCAATTCCGATTCCATTTCCGATCGCAATGGATTCTGCGTCGTCTTTGACGGTGACACAGATAGCGCTTTTCAAACCTCTGAAGCAGAAGCATCATTTCGTCAGAGGCAGAGTCAGTGTTATTAGACCACTTCATCGCCGCCTCAACTCCGTTTCGCCTCCGCGGTGCTCTTCCGCCGGTGACGACGCCGTCATTACTCTCCATGTTGGGGGAATGATGTGCGAGGGATGTACAAATAGCGTCAAAAAAATTCTAGAAAGCCGACCGCAAGTGTTATCTGCTCATGTAAATTTGACATCCGAGACAGCAACCGTTTCCCTTGTGCCTGAACAAAAAACTGCACCAGATGGTCTAAAGCAATTGGGGGAGGAACTTGCACAGCATTTAACTACATGTGGTTTTACTTCTACCCTTCGAGTGACAGATCAAGAAGATAGCAGCTGA 459 0.4728 MSSSLSIPIPFPIAMDSASSLTVTQIALFKPLKQKHHFVRGRVSVIRPLHRRLNSVSPPRCSSAGDDAVITLHVGGMMCEGCTNSVKKILESRPQVLSAHVNLTSETATVSLVPEQKTAPDGLKQLGEELAQHLTTCGFTSTLRVTDQEDSS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1484 152 PANTHER ATP7, ISOFORM B 58 142 - -
Gso8g1484 152 Pfam Heavy-metal-associated domain 71 128 IPR006121 GO:0046872
Gso8g1484 152 Gene3D - 66 147 - -
Gso8g1484 152 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 58 142 - -
Gso8g1484 152 SUPERFAMILY HMA, heavy metal-associated domain 66 119 IPR036163 GO:0046872
Gso8g1484 152 ProSiteProfiles Heavy-metal-associated domain profile. 69 143 IPR006121 GO:0046872
Gso8g1484 152 ProSitePatterns Heavy-metal-associated domain. 74 103 IPR017969 GO:0046872
Gso8g1484 152 CDD HMA 71 130 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1484 Gso-Chr8 14445171 14447425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1484 69 146 Primary Pumps ATPases AT4G33520 66.667 1.03e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1484 K17686 - gmx:100527143 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0459 15 4197889 4201629 Gso8g1484 8 14445171 14447425 GST