Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1482 ATGGATTGTTTCTGCTGCTTCAACAATCAGGTGGTTGGAGGACGCACTTCATGTGGCTCTGGCAAGGGCAAGAGCCATCAGGGCTCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATTGTCAAGCTTGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGACGGACACTTGGGAGACAGTGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGGCCATTCTTTCTGATAGTTCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTTATTGATAATCAGAAGTTATGGGTAGCAAATGTTGGAGACTCACGAGCAGTTTTGTCGAGAAAAGGGGTGGCCGAACAGATGACTATTGATCATGAGCCCAATACTGAGAGGGGCATCATTGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATTTAAAATCACACTTACGATCTGATCCTGATATACGACATGTTGATATTGACCCAGATGCTGAGCTTTTGATACTTGCCAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCACGAAGGATAAAAGATCCACAAAAGGCAGCTAAACAACTAGTTGCCGAGTCATTGAACAGAGAGAGTAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 843 0.4389 MDCFCCFNNQVVGGRTSCGSGKGKSHQGSVKYGFSLVKGKANHPMEDYHVAKIVKLGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQAILSDSSDLGRGGSTAVTAILIDNQKLWVANVGDSRAVLSRKGVAEQMTIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHVDIDPDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLVAESLNRESKDDISCIVVRFKG* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1482 280 SMART PP2C_4 27 276 IPR001932 -
Gso8g1482 280 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Gso8g1482 280 Gene3D - 16 280 IPR036457 -
Gso8g1482 280 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Gso8g1482 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 279 - -
Gso8g1482 280 PANTHER PROTEIN PHOSPHATASE 2C 5 279 IPR015655 GO:0004722|GO:0006470
Gso8g1482 280 CDD PP2Cc 30 278 IPR001932 -
Gso8g1482 280 SUPERFAMILY PP2C-like 28 279 IPR036457 -
Gso8g1482 280 SMART PP2C_SIG_2 42 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1482 Gso-Chr8 14414013 14418825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1482 1 279 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.39e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1482 K17506 - gmx:100787659 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1482 8 14414013 14418825 Gso8g1482 8 14414013 14418825 ECH
Gso15g0461 15 4219478 4224480 Gso8g1482 8 14414013 14418825 GST
Gso5g0994 5 32842650 32850872 Gso8g1482 8 14414013 14418825 PCT
Gso8g0594 8 5531424 5539630 Gso8g1482 8 14414013 14418825 PCT
Gso8g1482 8 14414013 14418825 Gso5g0994 5 32842650 32850872 PCT
Gso8g1482 8 14414013 14418825 Gso8g0594 8 5531424 5539630 PCT