Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1458 ATGGCTTCCACTTTGCTTCCCTTTCTATTCCTCTCAATGGTTCTGTTACCCTTTCAAACCATAGCCCAAACCAAAAGCAACATAGCCATTGGTGAGTCTCACACAGCAGGAGCCAGCACCTCCCCATGGCTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGGTTCCTCCCACTTGAGGACACTCCTGATCACTTCATGCTTTGCATTTGGTATGCCAAGATTCAAGACAAAACCATAGTATGGTTTGCCAACAGAGACCAGCCTGCACCAAAGGGCTCAAAAGTGGTGCTCACTGCTGATGATGGGTTGGTGCTCATCACGGCCCCAAATGGTCACATGTTATGGAAGACTGGTGGACTCCCTTTGAGAGTTTCTAGTGGTGTCTTAAATGACACTGGCAACTTTGTGCTTCAGGATGGTCACTCCAAGACTGTTTGGGAGAGTTTCAAGGACTATAGAGACACCTTGCTGCCATATCAGACTATGGAAAAGGGTCATAAGCTTTCTTCTAAACTTGGGAGGAATTACTTCAACAAGGGAAGGTTTGTGCTCTTTTTCCAAAATGATGGTAACCTTGTGATGCACTCTATAAACATGCCATCTGGGTATGCTAATGAAAACTACTATCAAAGTGGAACAATTGAGTCCAACACCAACACATCAACAAGTGCTGGGACTCAATTGGTGTTTGATGGGACAGGAGACATGTATGTTTTGAGAAAAAACAATGAGAAATACAACTTGTCAAAAGGGGGTAGTAGAGCTTCTTCTACCACTCAATTTTATTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACACTCTATCAACATCCAAAGGGTTCTTCTGGAAGTGGAGGTTGGAGCCAAGTGTGGTCTCATCCAGATAATATCTGTAAGGATTATGTTGCTAGTGCTGGTAGTGGTGTTTGTGGATATAATAGCATTTGCAGTTTAAGAGATGATAAGAGGCCAAATTGTCGGTGCCCAAAATGGTACTCGCTGGTTGACCCTAATGATCCCAATGGTAGCTGCAAACCAGATTTTGTACAAGCATGTGCAGTAGATAAGCTTAGTAATAGACAGGATCTCTATGATTTTGAGGTGTTGATAGATACTGATTGGCCTCAATCAGATTATGTGCTTCAAAGACCATTCAATGAAGAACAATGCAGACAATCTTGTATGGAAGATTGTATGTGTTCTGTTGCAATTTTCAGGCTAGGTGATAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAGTTGATGCCACACTTAATGGTGCAAAGGCCTTCATGAAAGTGAGGAAAGACAACTCCTCCTTGATTGTTCCTCCAATCATTGTGAACAAGAATAATAAGAACACTTCGATTTTAGTTGGCTCAGTGCTTTTGGGTAGTTCTGCTTTTCTCAATCTCATATTGGTTGGAGCAATCTGCTTGAGCACTTCCTATGTTTTTCGGTACAAGAAGAAGCTTAGAAGTATTGGCAGAAGTGACACCATTGTGGAAACCAACTTGCGTCGCTTCACTTATGAGGAACTCAAAAAAGCCACCAATGACTTTGACAAAGTGCTAGGAAAGGGAGCTTTTGGTATTGTGTATGAAGGAGTCATCAACATGTGTTCTGATACTCGTGTAGCGGTAAAAATGTTAAACACTTTTCTCATGGAAGATGTTCATAAGGAATTCAAGAATGAACTGAATGCCATTGGCCTCACACACCATAAGAACTTGGTCCGTTTACTTGGATTTTGTGAGACTGAAGAAAAAAGGTTGTTGGTTTATGAGTATATGAGTAATGGCACTTTAGCAAGTCTTCTTTTCAATATTGTGGAGAAACCAAGTTGGAAACTGAGGCTACAAATTGCAATTGGGATTGCTAGAGGACTTCTATATTTGCATGAAGAGTGCAGCACACAGATCATTCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGATTACTATAATGCAAGGATTTCGGACTTTGGATTGGCCAAGCTTTTGAACATGAACCAAAGCAGAACCAATACTGCCATAAGAGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAACATGCCGATCACAGCTAAAGTGGATGTCTATAGTTATGGGGTGTTGTTGCTTGAGATAGTTTCATGTAGAAAAAGTGTAGAATTCGAGGCAGAAGATGAAGAGAAAGCAATCCTAGCTGAATGGGCTTATGACTGCTACATTGAAGGAACTCTTCATGCCCTAGTTGAGGGTGACAAAGAGGCATTGGATGACATGAAGACCTTCGAGAAATTGGTAATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTAGTCTTAGACCAACTATGAGAAATGTGACACAGATGCTTGAAGGTGTTGTTGAAGTGAAAATGCCACCATGCCCCTCACAATTTAGTGTTCAATATTCCTAA 2451 0.4153 MASTLLPFLFLSMVLLPFQTIAQTKSNIAIGESHTAGASTSPWLVSSPSGDFAFGFLPLEDTPDHFMLCIWYAKIQDKTIVWFANRDQPAPKGSKVVLTADDGLVLITAPNGHMLWKTGGLPLRVSSGVLNDTGNFVLQDGHSKTVWESFKDYRDTLLPYQTMEKGHKLSSKLGRNYFNKGRFVLFFQNDGNLVMHSINMPSGYANENYYQSGTIESNTNTSTSAGTQLVFDGTGDMYVLRKNNEKYNLSKGGSRASSTTQFYYLRATLDFDGVFTLYQHPKGSSGSGGWSQVWSHPDNICKDYVASAGSGVCGYNSICSLRDDKRPNCRCPKWYSLVDPNDPNGSCKPDFVQACAVDKLSNRQDLYDFEVLIDTDWPQSDYVLQRPFNEEQCRQSCMEDCMCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLIVPPIIVNKNNKNTSILVGSVLLGSSAFLNLILVGAICLSTSYVFRYKKKLRSIGRSDTIVETNLRRFTYEELKKATNDFDKVLGKGAFGIVYEGVINMCSDTRVAVKMLNTFLMEDVHKEFKNELNAIGLTHHKNLVRLLGFCETEEKRLLVYEYMSNGTLASLLFNIVEKPSWKLRLQIAIGIARGLLYLHEECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFEAEDEEKAILAEWAYDCYIEGTLHALVEGDKEALDDMKTFEKLVMIALWCVQEDPSLRPTMRNVTQMLEGVVEVKMPPCPSQFSVQYS* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1458 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gso8g1458 816 Gene3D Transferase(Phosphotransferase) domain 1 603 805 - -
Gso8g1458 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Gso8g1458 816 SUPERFAMILY Protein kinase-like (PK-like) 506 797 IPR011009 -
Gso8g1458 816 CDD B_lectin 44 150 IPR001480 -
Gso8g1458 816 Pfam Protein tyrosine and serine/threonine kinase 526 796 IPR001245 GO:0004672|GO:0006468
Gso8g1458 816 Pfam D-mannose binding lectin 79 164 IPR001480 -
Gso8g1458 816 Gene3D - 21 151 IPR036426 -
Gso8g1458 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 812 - -
Gso8g1458 816 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Gso8g1458 816 SMART blect_4 33 154 IPR001480 -
Gso8g1458 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 214 IPR036426 -
Gso8g1458 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 13 812 - -
Gso8g1458 816 Gene3D Phosphorylase Kinase; domain 1 499 602 - -
Gso8g1458 816 Gene3D - 152 285 IPR036426 -
Gso8g1458 816 ProSiteProfiles Protein kinase domain profile. 524 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1458 816 SMART serkin_6 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1458 816 ProSitePatterns Protein kinases ATP-binding region signature. 530 554 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1458 Gso-Chr8 14153220 14155866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1458 510 798 Receptor kinase-like Gene Family AT1G60800 42.857 3.30e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso8g1458 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1458 - - gmx:100776632 1644.79