Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1450 ATGGCTGCTTTCCAAAGCATCAACAACATTGAAACTCAACAAATTCCACCAGAGCTCCTCATATCTCAAATCATGCAACTCCATGCAAGCATCTCCAAGCTTGAATCCCTAAGGCCATGCAAGCAAGTCAATAGTCACTTCACCCACCTAGTGAAGCTTTGCACCCTCCCTTCAACCATTGACATCGAAGCCTTGCCCAAAGAGGTGCAAGACATGCGTGATAGCCTCATTAACCTAAGTGGCCACGCCGAGGGGCTCCTAGAGCTCGAATTCTCGACCTTCATAAGCCTCACACCTGAGCCAATGAAAAATGTAACCCTATTCCCTTATTACGGGAACTATGTCAAGCTAGCCAACATGGAGAGCAAAATCCTCAAAGAAAACGGGGTTTTGAGCCCTAAGAAAGTGGCCTTTGTAGGGTCAGGGCCAATGCCACTCACCTCCATCGTCATGGCCACTCACCACATGGAATCCACACACTTTGACAACTTTGACATCGACGAAAAGGCGAACGAGGTGGCACGAAAGATCGTGGCTTCGGACTCGGCCCTCGAGAAGAGGATGAAGTTTGAGACACAGGATGTGATGGAAGTGAGGGAGAGATTAGGGCAATATGATTGCATCTTTCTGGCTGCGCTTGTGGGAATGAGTAGGGAAGCAAAAGTGAAGATTTTGGGACATATAAGGAAGTATATGAAGGAGGGAGGGACTTTGCTTGTGAGAAGTGCAAAAGGGGCTAGGGCTTTCTTGTACCCTATTGTTGAGGAACGTGACATGGTGAATTTTGAGGTTCTTACCATCTTTCACCCCACAAATGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAAGCTTAA 861 0.4715 MAAFQSINNIETQQIPPELLISQIMQLHASISKLESLRPCKQVNSHFTHLVKLCTLPSTIDIEALPKEVQDMRDSLINLSGHAEGLLELEFSTFISLTPEPMKNVTLFPYYGNYVKLANMESKILKENGVLSPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDIDEKANEVARKIVASDSALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGTLLVRSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1450 286 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 12 286 IPR004298 GO:0030410|GO:0030418
Gso8g1450 286 PANTHER NICOTIANAMINE SYNTHASE 3 9 285 IPR004298 GO:0030410|GO:0030418
Gso8g1450 286 PANTHER NICOTIANAMINE SYNTHASE 9 285 - -
Gso8g1450 286 CDD AdoMet_MTases 164 240 - -
Gso8g1450 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 242 IPR029063 -
Gso8g1450 286 Pfam Nicotianamine synthase protein 18 285 IPR004298 GO:0030410|GO:0030418
Gso8g1450 286 Gene3D Vaccinia Virus protein VP39 19 285 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1450 Gso-Chr8 14094268 14095480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1450 19 283 Nicotianamine Synthase Gene Family AT5G56080 51.301 1.07e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1450 K05953 - gmx:100775553 561.222