Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1445 ATGATGGCAATATTGGAGTGTAGTAATAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTGTTGTTTTGTCTTGGTATTATGGTCCTTGTGAATTCGGTTAATGAAGAGGGTTTGAGTCTTTTGAGATTCAAAGCTTCCCTTCTTGACCCAAACAACAATCTCTATAACTGGGATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTACTGCACAGGTTCAGTGGTAACTTCTGTGAAACTTTACCAACTCAATCTGTCTGGTGCTTTGGCTCCTTCCATCTGTAATCTTCCAAAGCTTCTTGAGTTGAATTTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGATGGTTTTGTTGACTGTTGTGGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGACCCCTATTTGGAAAATCACAACACTTAGAAAGCTTTACTTGTGTGAAAACTACATGTTTGGTGAAGTGCCAGAGGAGCTTGGGAATTTGGTATCACTTGAGGAGTTGGTCATTTATAGCAATAACTTAACTGGAAGAATTCCATCATCAATAGGAAAGTTGAAGCAGCTTAGAGTTATAAGGGCAGGTTTGAATGCACTCTCAGGGCCAATACCTGCTGAAATCAGTGAGTGTGAGAGCTTGGAGATATTGGGGTTGGCACAGAATCAGCTAGAAGGTTCAATTCCAAGGGAGCTACAAAAGCTTCAGAACCTCACCAATATAGTTCTGTGGCAAAACACTTTCTCTGGGGAGATTCCTCCAGAGATTGGAAACATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTGATTGGTGGTGTCCCTAAGGAAATTGGGAAGCTGTCCCAGCTTAAGAGGTTGTACGTGTACACCAACATGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAAAGCTATTGAGATAGACCTTTCTGAGAACCATTTGATTGGGACCATTCCCAAGGAGTTGGGAATGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAGAACAATCTGCAGGGTCATATTCCAAGGGAGCTTGGTCAGTTGAGGGTGCTAAGAAATTTAGACCTGTCACTGAATAACTTGACAGGTACAATTCCCCTTGAGTTTCAAAACCTTACATACATGGAGGATTTACAGCTGTTTGACAATCAACTTGAGGGTGTGATTCCTCCTCATCTTGGAGTTATTAGAAACCTTACTATTCTTGATATATCTGCAAACAACCTTGTTGGTATGATACCCATCAATCTTTGTGGATATCAGAAGCTGCAATTCCTTAGCCTTGGTTCAAATAGGTTGTTTGGAAACATTCCTTATAGCCTCAAAACATGCAAATCTCTTGTGCAGCTTATGCTAGGGGACAACCTTTTGACAGGAAGCCTACCTGTGGAATTGTATGAGCTTCACAATCTCACTGCACTTGAACTCTATCAGAACCAGTTTTCGGGGATAATAAACCCGGGTATAGGCCAACTTAGGAATCTAGAGAGGCTTCGGTTGTCGGCTAACTACTTTGAAGGCTATCTCCCTCCTGAGATTGGAAATTTGCCACAACTGGTCACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGCATTCCTCATGAGTTGGGAAACTGTGTTAGACTGCAGAGGCTTGATCTTAGCAGGAACCACTTCACTGGCATGCTTCCAAATGAAATTGGCAACTTGGTGAACTTGGAGCTGTTGAAAGTTTCTGATAACATGCTCTCAGGAGAAATACCAGGCACTTTGGGGAATCTTATTAGGCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCTTTTCACTTGGGAAGACTGGGAGCTCTTCAGATTGCACTTAACCTGAGCCATAACAAACTTTCTGGCTTAATTCCTGATAGCCTTGGGAACTTGCAAATGCTAGAGTCCCTTTATCTAAATGACAATGAACTTGTTGGTGAAATTCCTTCATCAATTGGTAACCTTCTCAGTCTTGTAATATGCAATGTATCTAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAACGGCTTGTGCCGTGTTGGTACCAATCACTGCCATCAATCTCTATCTCCCTCTCATGCTGCAAAACATAGCTGGATCAGAAATGGTTCATCAAGGGAAATTATAGTGAGTATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTAATTTTCATAGTGTGTATATGTTTCGCCATGAGGCGGCGTAGCCGTGCTGCTTTTGTTTCACTTGAAGGGCAAACAAAGACTCATGTCTTAGATAACTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACAGGAAATTTTTCAGAAGCTGCAGTTCTAGGAAGAGGAGCTTGTGGCACTGTTTACAAGGCTGCTATGAGTGATGGTGAAGTTATTGCTGTCAAGAAACTGAATTCCCGTGGAGAAGGAGCGAATAATGTTGACAAAAGCTTCCTTGCTGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTGTATGAATACATGGAAAATGGAAGCCTTGGAGAACAACTTCATTCAAGTGCAACCACTTGTGCATTGGATTGGGGTAGTCGATATAAAATTGCTCTCGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAGCCTCAGATCATCCATCGCGATATAAAGTCAAACAACATATTGCTTGATGAGGTGTTTCAGGCTCATGTTGGAGACTTTGGCTTGGCTAAGTTGATTGATTTTTCCTACTCAAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAACTAATTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGAGATTTAGTGACTTGTGTGAGAAGAGCAATTCAAGCATCAGTACCAGCATCTGAATTATTTGACAAGAGATTGAATCTTAGTGCACCAAAGACAGTTGAAGAAATGTCTCTAATTCTTAAAATAGCCCTGTTCTGCACCAGCACATCTCCACTAAATAGACCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAGCAACTCACCAACCTCTCCCACATCAGAATCTCCATTGGATGAGGATGATGGCATTTCTTCCAAAGATGGTGGTTTTGAGTTGTAA 3360 0.4196 MMAILECSNSFHFLNGVYMVLLFCLGIMVLVNSVNEEGLSLLRFKASLLDPNNNLYNWDSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGALAPSICNLPKLLELNLSKNFISGPIPDGFVDCCGLEVLDLCTNRLHGPLLTPIWKITTLRKLYLCENYMFGEVPEELGNLVSLEELVIYSNNLTGRIPSSIGKLKQLRVIRAGLNALSGPIPAEISECESLEILGLAQNQLEGSIPRELQKLQNLTNIVLWQNTFSGEIPPEIGNISSLELLALHQNSLIGGVPKEIGKLSQLKRLYVYTNMLNGTIPPELGNCTKAIEIDLSENHLIGTIPKELGMISNLSLLHLFENNLQGHIPRELGQLRVLRNLDLSLNNLTGTIPLEFQNLTYMEDLQLFDNQLEGVIPPHLGVIRNLTILDISANNLVGMIPINLCGYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELYQNQFSGIINPGIGQLRNLERLRLSANYFEGYLPPEIGNLPQLVTFNVSSNRFSGSIPHELGNCVRLQRLDLSRNHFTGMLPNEIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISFHLGRLGALQIALNLSHNKLSGLIPDSLGNLQMLESLYLNDNELVGEIPSSIGNLLSLVICNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTNHCHQSLSPSHAAKHSWIRNGSSREIIVSIVSGVVGLVSLIFIVCICFAMRRRSRAAFVSLEGQTKTHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAAMSDGEVIAVKKLNSRGEGANNVDKSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWGSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGRSPVQPLEQGGDLVTCVRRAIQASVPASELFDKRLNLSAPKTVEEMSLILKIALFCTSTSPLNRPTMREVIAMLIDAREYVSNSPTSPTSESPLDEDDGISSKDGGFEL* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1445 1119 SMART LRR_typ_2 483 507 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 291 315 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 579 603 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 531 555 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 363 386 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 99 123 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 627 651 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 652 676 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 171 195 IPR003591 -
Gso8g1445 1119 SMART LRR_typ_2 556 578 IPR003591 -
Gso8g1445 1119 Gene3D Phosphorylase Kinase; domain 1 774 888 - -
Gso8g1445 1119 SMART serkin_6 810 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1445 1119 MobiDBLite consensus disorder prediction 1092 1119 - -
Gso8g1445 1119 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Gso8g1445 1119 Gene3D Ribonuclease Inhibitor 38 144 IPR032675 -
Gso8g1445 1119 Gene3D Ribonuclease Inhibitor 341 408 IPR032675 -
Gso8g1445 1119 Gene3D Ribonuclease Inhibitor 409 728 IPR032675 -
Gso8g1445 1119 Gene3D Ribonuclease Inhibitor 145 234 IPR032675 -
Gso8g1445 1119 Pfam Protein kinase domain 812 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1445 1119 SUPERFAMILY RNI-like 368 691 - -
Gso8g1445 1119 SUPERFAMILY Protein kinase-like (PK-like) 787 1084 IPR011009 -
Gso8g1445 1119 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1095 - -
Gso8g1445 1119 Pfam Leucine Rich Repeat 557 579 IPR001611 GO:0005515
Gso8g1445 1119 Pfam Leucine Rich Repeat 634 652 IPR001611 GO:0005515
Gso8g1445 1119 Gene3D Transferase(Phosphotransferase) domain 1 889 1102 - -
Gso8g1445 1119 ProSiteProfiles Protein kinase domain profile. 810 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1445 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Gso8g1445 1119 Gene3D Ribonuclease Inhibitor 235 340 IPR032675 -
Gso8g1445 1119 SUPERFAMILY L domain-like 37 316 - -
Gso8g1445 1119 PANTHER OS07G0152200 PROTEIN 18 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1445 Gso-Chr8 14035159 14040903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1445 56 1089 Receptor kinase-like Gene Family AT1G73080 37.442 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso8g1445 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1445 - - gmx:100818311 2197.55