LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso8g1444	ATGGAGGAGCCAACGTTGTTGTTCCCCGACACCGACCTCGATCTCAGCTTCACCAGCACCACCACTGACCGCACCACCACCACCACCACCACCAGTGCAAGAACAAGCCTCGCCCGCACTAGCAGCCTCACCCTCAGCTTCAACGACCGTTTGTCCACATTCTCCGCCTCGGAAACCACCACCGCCTCCCTTATCAGCCGCCGTCCCCACCGGAGCGGCGATCCCAACTGGTCCGCCATTCAGGCCGCCGTCAACCTCTCCTCCGACGGCCGCCTCCACCTCCGCCACCTTAAGCTCCTCCGCCACCTCGGCTCCGGCAACCTCGGCCGCGTCTTCCTCTGCCGCCTCCGTGACTACGACGGCGCCCACTTCGCCCTCAAGGTCGTCGACAAAGACCTCCTCACCCCGAAGAAACTCTCCCACGCGCAGACCGAAGCGGAGATCCTACACGCGCTGGACCACCCCTTCCTCCCCACTCTCTACGCGCGTATCGACGTTTCGCATTACACGTGCCTTCTCATGGACTTCTGCCCCGGCGGCGACCTCCACTCCCTCCTCCGCAAACAGCCCCAGTTTCGTCTCCCCCTCGCGGCGGCGCGTTTCTTCGCCGCCGAGGTCCTCGTCGCCCTGGAGTACCTCCACGCGCTCGGCATCGTCTACCGCGACCTCAAACCCGAGAACGTCCTCCTGCGCGACGACGGCCACGTCATGCTCTCGGATTTCGATTTGTGCTTCAAATCGGACGTGGCACCAAACGTCAACTTCCGGTCCCACACCTCACCACCTCGCGTGGGCCCCACGAGCGGTTGCTTCAGTTGTAATAATAATAACCGCCACCGAGAAAAGTTGGTTGCAGAGTTCGTGGCGGAACCGGTGACGGCGTTTTCACGGTCGTGCGTTGGGACGCACGAGTATTTAGCTCCCGAGCTTGTCTCGGTTAACGGTCACGGTAACGGCGTGGACTGGTGGGCTTTTGGGGTTTTCGTTTACGAGTTGTTGTACGGGACGACGCCGTTTAAGGGGTGTAGCAAGGAGGGCACGCTGCGCAATATAGCATCAAGCAAGGATGTGAGGTTCGTCCACGTGGCGGAGCGAGAGGAGGCAGGGATGGCCGAGGCGAGGGATTTGATTGAGAAGTTGTTGGTGAAGGACCCTAGGAAGAGGCTAGGGTGCGCTAAGGGTGCTACTGAGATTAAACTACACCCTTTTTTTTATGGAATTAAGTGGCCTTTGATTAGGACTTATAGGCCACCGGAGGTCAAGGGATTCATCAGAAGGAATAAGTCCAACGTTACTTGCAAGAGAAACACCTGCTGGTGGAAGAGACTAGGGCTTCTTGTGAGGAACAAAGGGGGATGTCGAGGATATTGGGGTGGAAGAGAAGTTTAA	1389	0.5889	MEEPTLLFPDTDLDLSFTSTTTDRTTTTTTTSARTSLARTSSLTLSFNDRLSTFSASETTTASLISRRPHRSGDPNWSAIQAAVNLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGAHFALKVVDKDLLTPKKLSHAQTEAEILHALDHPFLPTLYARIDVSHYTCLLMDFCPGGDLHSLLRKQPQFRLPLAAARFFAAEVLVALEYLHALGIVYRDLKPENVLLRDDGHVMLSDFDLCFKSDVAPNVNFRSHTSPPRVGPTSGCFSCNNNNRHREKLVAEFVAEPVTAFSRSCVGTHEYLAPELVSVNGHGNGVDWWAFGVFVYELLYGTTPFKGCSKEGTLRNIASSKDVRFVHVAEREEAGMAEARDLIEKLLVKDPRKRLGCAKGATEIKLHPFFYGIKWPLIRTYRPPEVKGFIRRNKSNVTCKRNTCWWKRLGLLVRNKGGCRGYWGGREV*	463

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso8g1444	462	ProSiteProfiles	Protein kinase domain profile.	97	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso8g1444	462	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	218	230	IPR008271	GO:0004672\|GO:0006468
Gso8g1444	462	SMART	serkin_6	97	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso8g1444	462	Pfam	Protein kinase domain	99	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso8g1444	462	Gene3D	Phosphorylase Kinase; domain 1	96	180	-	-
Gso8g1444	462	Gene3D	Transferase(Phosphotransferase) domain 1	296	418	-	-
Gso8g1444	462	PANTHER	TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED	8	435	-	-
Gso8g1444	462	Gene3D	Transferase(Phosphotransferase) domain 1	181	247	-	-
Gso8g1444	462	SUPERFAMILY	Protein kinase-like (PK-like)	76	419	IPR011009	-
Gso8g1444	462	PANTHER	FLIPPASE KINASE 1-RELATED	8	435	-	-

Showing 1 to 10 of 10 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso8g1444	Gso-Chr8	14023433	14027305	Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso8g1444	1	455	AGC Kinase Gene Family	AT3G14370	65.605	0.0	554

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Gso8g1444		Pkinase	5.3e-54	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso8g1444	-		K08286	gmx:100817778	863.988

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso8g1444	8	14023433	14027305	Gso8g1444	8	14023433	14027305	ECH

Showing 1 to 1 of 1 entries

Previous1Next