Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1433 ATGGCTTCCGAGAACGTAAGCACCGATACGGTGTCGAAAGCCGTCGACGCTCTCCTGAAATGGCGTCGCTCCCAATCTGAAACCCTAAAACCAAAACTCTTCGACGAAGACGAGGAATATGTGTACCTGATCCTGACGCTGAAGAAGATCCCTTCAAAATCCCGCGTGAACCCTCACAAGATCCCTCTCCCCCACTCCCTCTTCTCCCCTTTCTCCGAGCAGTGCCTCATCCTCGACGACCGCCCAAACAAGGCCCGCGTCACCAAAGCCCAGGCCCAAGCCCGCATCCAGTCGGAATCCATCCCCGTCAATAAAATCCTCAAGCTCTCCAAGCTCGCCTCCGACTACCGCCCCTTCGAGGCCAAGCGGAAGCTCTGCGACTCCTACGATCTCTTTTTCGCTGAGAAGAGCATTGTGCCGCTCCTTCCGCGGCTTCTCGGGAAGAGTTTCTTCAAGAAGAGGAAGATTCCGGTGCCGGTGGATTTGAAGAAGGGGAACTGGAAGGAGCAGGTGGAGAAGGCATGTTCGTCCGCGATGCTGTTCATGAGGACTGGGACCTGCAGTGTTGTTAGGGTTGCCAAGGTGAGGATGGAGAGGGATGAGATTGTTGAGAATGTCGTTGCCGCGATTGAAGGCGCTGTGGAGGTTGTCCCGAAGAAGTGGGGGAATGTGAGGTCCTTGCATTTGAAGCTGCTGGAGAGCCTGGCGCTGCCGGTGTACCAGACGGTTCCGGATGTGAAATTGAAGATTGATGGATTTAAAGTCGAGGAGGGGGCGACGACGACGACGAAGAAGAAGAATGAAACGAAGGAGAAGGACAGTGAGGGTGAGGTTAGTGATTCGAAGAAGAAGAAGGGGAGGATTCATGAGGTTAGGTACATGGATGAGATTGAAGATCAATTGGCCAGCGATGATAGTGAAGATGAGATGGTGAGTAAGAAGAGGAAGAAAGGAGGTTCGAGTGAGTTGAGTGGTGTTGAGCAATTGAAGAAGTTGGTGTTTAATGAGTTGACTGCCAAGGGGAAGAAGAAGAAGAAGGGCTTGTCTGTTGGGGGGGTTAAGGGAGATGCGATTGAGGGGAGTGGAAGTGAGTTGGTTGTTAAGGATCAAGAGTCAGGAGTGAAGAAGAAGAAGAAGAAGCGAGAGGAAGTGAAGGCAAAGGCTACTAAAAGTGTAAAGGCTACGAAAGGTGTGAAGGCTAAGAAAATTAAGAAGGCTGCGTGA 1224 0.518 MASENVSTDTVSKAVDALLKWRRSQSETLKPKLFDEDEEYVYLILTLKKIPSKSRVNPHKIPLPHSLFSPFSEQCLILDDRPNKARVTKAQAQARIQSESIPVNKILKLSKLASDYRPFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKGNWKEQVEKACSSAMLFMRTGTCSVVRVAKVRMERDEIVENVVAAIEGAVEVVPKKWGNVRSLHLKLLESLALPVYQTVPDVKLKIDGFKVEEGATTTTKKKNETKEKDSEGEVSDSKKKKGRIHEVRYMDEIEDQLASDDSEDEMVSKKRKKGGSSELSGVEQLKKLVFNELTAKGKKKKKGLSVGGVKGDAIEGSGSELVVKDQESGVKKKKKKREEVKAKATKSVKATKGVKAKKIKKAA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1433 407 MobiDBLite consensus disorder prediction 392 407 - -
Gso8g1433 407 CDD Ribosomal_L1 11 239 IPR028364 -
Gso8g1433 407 MobiDBLite consensus disorder prediction 302 322 - -
Gso8g1433 407 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 4 298 - -
Gso8g1433 407 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 4 298 - -
Gso8g1433 407 Coils Coil 367 387 - -
Gso8g1433 407 MobiDBLite consensus disorder prediction 263 285 - -
Gso8g1433 407 Pfam Ribosomal protein L1p/L10e family 32 234 IPR028364 -
Gso8g1433 407 Gene3D - 85 177 IPR016095 -
Gso8g1433 407 MobiDBLite consensus disorder prediction 306 321 - -
Gso8g1433 407 MobiDBLite consensus disorder prediction 341 407 - -
Gso8g1433 407 SUPERFAMILY Ribosomal protein L1 36 240 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1433 Gso-Chr8 13891265 13893024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1433 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 30.097 3.30e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1433 K14775 - gmx:100815650 689.493