Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1427 ATGGAAGGAGAAAGTGTTTCAAGTTCAAGTAAGTCACAAAATGATGTCATAGAGAAAATGTCTCTCAATGAGGGCATGGAGGATGGGAATGGGGAAGCGCCAGAGCACGGTCTCCAAAAGTTGGTACAATTTAATGAGGAAGTTGAAGAACCTAAAGTTGGGATGACTTTCCCTTCTGAGCAGGAGATTTTCAATTATTACACTAATTTTGCTCAGCATAAGGGTTTTGAAGTGTATAGAAGAACTTCGAAAATGGAAGAAGATGGGAAGAAATATTTTACACTTGCTTGCGTTTGTTCTAGGAGGTCAGAAAACAAGCGAAGCCATCTTCTGAATCCATATCTTGTTACAAAAACCCAGTGTAAGGCAAGAATTAATGCGTGTTTATGTCTGGATGGAAAGATCAGAGTTTTAAGTGTTGCGCTTGATCATAATCATGAGCTGTGTCCAGGCAAAGCACGGCTTATTAAATATACTAAAAAATCTAAGCCTCAAAGAAAAAGGAAACATGATCTTAGCAATCTGGCTGGGATCAATGGGGATGGAAGTATTCAATCTCCAGGTGTGGAAGCTGGAGAACATGGAAGCCTAGGATTTTTTGATAAAAATCGTAGGATCTTCATTCAGAAAGCTAGTAGCCTAAGATTTGAGAGTGGAGATGCTGAAGCAATTCAAAGCTATTTTGTTCGAATGCAAAAGATAAATAGTAGCTTCTATTATGTGATGGACTTGGATGATGACTGCCGACTAAGAAATGTTTTTTGGGCAGATGCAAGAAGTAAGGCTGCAAATGAGTATTTTGGAGATGTTGTAACTTTTGACACCACATATTTAACAAACAAGTACAACATTCCTCTTGCTCTTTTTCTAGGAGTGAATCACCATGGACAATCAGTATTACTTGGTATTGCTTTGTTGTCAAATGAAGATGCTGAAACTTTTACATGGTTATTTCAGACATGGCTGGCATGCATGTCTACTGGACATGCGCCAATTGCCATCATCACAAGGGAAGATAGAGCAATAAAAACTGCAATTGAGATTGTATTCCCAAAAGCTCGTCAGCGGTGGTGTTTGTCGCACATAATGAAAAGGGTATCTGAAAAGTTGAGAGGATATCCTCGGTATGAGTCAATCAAAACAGATTTTGATGGTGCTGTATATGATTCTTTTAGTAAAGATGATTTCAATGAGAGTTGGAAAAAATTAATTTATAGTCATAACCTTCATGACAATGAATGGTTGAATAGCCTGTATAATGAGCGCCACCGATGGGTTCCTGTGTATGTCAAAGACACATTTTGGGCTGGAATGTCTACAATAGATAGAAATGAAAGTGTGCATGCATTTTTTGATGGATATGTTTGCTCAAAAACAAGTTTAAAGCAGTTTTTTAAGCAGTTTGACAATGCTATGAAAGATAAAGTTGAAAAAGAGTGCTTAGCAGATTTTAATTCCTTTAATAATTTAATTCCTTGTAGAAGCCATTTTGGTATTGAGTACCAATTTCAAAAAGTTTATACCAATGGGAAATTCAAAGAGTTTCAAGAAGAGGTAGCCTGTATCATGTATTGCAATGCTGCCTTTGAGAAGAAAGAAGGCTTGGTTTCAGCATATTCTGTTGTGGAGAGTAAAAAGATTCAAGAAGCAATCAAATATGTAACTTTCAATGTACAATTTAATGAAGAAGATTTTGAAGTGCAATGTGAATGTCATTTGTTTGAGTTTAAAGGTATTTTATGCAGACATATCCTCTCTTTGCTCAAGCTCATAAGGAAAACAGAGTCAGTGCCATCTAAGTATGTTTTCTCGCATTGGAGGAAAGATTTGAAGCGGAAACACACGTTAGTCAGAAGTAGTTATGGTGATTTAATTGCTAATCCTGAAGCAGAACGACTTGATAAGATGTGCAATGCTTTTCAGGAAGTTGCTTGTATGGGGGTAAATACTGATGTTGATTTCAAGAAAGTGATGAAATGGATTGATGACTTAAAAGTTGAATTAAGTTGTAAAAAGACTTCTACTGGAATAACTGAAACACTCCCTATTGCATCAAACATGTCATGA 2067 0.3657 MEGESVSSSSKSQNDVIEKMSLNEGMEDGNGEAPEHGLQKLVQFNEEVEEPKVGMTFPSEQEIFNYYTNFAQHKGFEVYRRTSKMEEDGKKYFTLACVCSRRSENKRSHLLNPYLVTKTQCKARINACLCLDGKIRVLSVALDHNHELCPGKARLIKYTKKSKPQRKRKHDLSNLAGINGDGSIQSPGVEAGEHGSLGFFDKNRRIFIQKASSLRFESGDAEAIQSYFVRMQKINSSFYYVMDLDDDCRLRNVFWADARSKAANEYFGDVVTFDTTYLTNKYNIPLALFLGVNHHGQSVLLGIALLSNEDAETFTWLFQTWLACMSTGHAPIAIITREDRAIKTAIEIVFPKARQRWCLSHIMKRVSEKLRGYPRYESIKTDFDGAVYDSFSKDDFNESWKKLIYSHNLHDNEWLNSLYNERHRWVPVYVKDTFWAGMSTIDRNESVHAFFDGYVCSKTSLKQFFKQFDNAMKDKVEKECLADFNSFNNLIPCRSHFGIEYQFQKVYTNGKFKEFQEEVACIMYCNAAFEKKEGLVSAYSVVESKKIQEAIKYVTFNVQFNEEDFEVQCECHLFEFKGILCRHILSLLKLIRKTESVPSKYVFSHWRKDLKRKHTLVRSSYGDLIANPEAERLDKMCNAFQEVACMGVNTDVDFKKVMKWIDDLKVELSCKKTSTGITETLPIASNMS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1427 688 MobiDBLite consensus disorder prediction 1 19 - -
Gso8g1427 688 ProSiteProfiles Zinc finger SWIM-type profile. 554 592 IPR007527 GO:0008270
Gso8g1427 688 SMART 26again6 567 594 IPR006564 GO:0008270
Gso8g1427 688 Pfam SWIM zinc finger 564 588 IPR007527 GO:0008270
Gso8g1427 688 PANTHER OS03G0843700 PROTEIN 2 662 - -
Gso8g1427 688 Pfam MULE transposase domain 270 365 IPR018289 -
Gso8g1427 688 Pfam FAR1 DNA-binding domain 65 149 IPR004330 -
Gso8g1427 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 662 IPR031052 GO:0006355
Gso8g1427 688 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1427 Gso-Chr8 13830601 13835019 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso8g1427 MULE 1e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1427 - - gmx:100813525 1400.57