Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1410 ATGGGTGTGAACGAAGATTTCAACAAGGATATTGATGATCATCATCATGAGTATGTGGATGATGATGATGTTCCTCTTCCGGGGTTTCGTTTCCACCCTACAGATGAAGAACTTGTTAGTTTCTATCTTCGAAGGAAGCTTCACAAGAAACCCATCAGCATCGAGCTCATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCAAAAACCAGTGCCACTGGAGAAGAGAAAGAAGGGTACTTCTTTTGCAGAAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACTGGCTCAGGGTTCTGGAAAGCAACTGGCATAGACAAGCCAGTGTACTCACATGGAGGAGAAGGAAATGACTGCATTGGCCTAAAAAAAACACTGGTGTACTACCGTGGCAGTGCAGGCAAAGGCATCAAAACTGATTGGATGATGCACGAGTTTCGCCTTCCTTCTAACAAAGACAACACCACCAACCTTCCCAGCTCCAAGAATTACGTAGATGTTCCCCAAGAAGCTGAAATTTGGACATTGTGTCGAATATTCAAGAGAAATGTCTCACAGAGAAAGCACACGCCAGACTTGAAACAATTATCTGCTAAGCGCCAGTCCATTCATGACAAGAACTCAAGAATGAGCAACGTGGAGTTCAACAATACTAATCAAGAATCATATATAAACTTTGGTGGCCACTATCACAATGAGCAGAAACCCGTGATTAACTACACAAACAGTGATCAAAGGAATCAGTATCATGTGATGACTCATCAGTTGTTTGCTGCTCCAGTGGCACAGCATCATCAGCAACCTCAACAACTAACTTCTCCATCTTCTAACTTTTGGCTTAACAGCCCTCCTGGGAACGACTTCTTCACGTTTGATAACTGGGATGAGCTTGGATCTGTAGTGAAGTTTGTGGTTGATTAG 942 0.4299 MGVNEDFNKDIDDHHHEYVDDDDVPLPGFRFHPTDEELVSFYLRRKLHKKPISIELIKQIDIYKYDPWDLPKTSATGEEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSHGGEGNDCIGLKKTLVYYRGSAGKGIKTDWMMHEFRLPSNKDNTTNLPSSKNYVDVPQEAEIWTLCRIFKRNVSQRKHTPDLKQLSAKRQSIHDKNSRMSNVEFNNTNQESYINFGGHYHNEQKPVINYTNSDQRNQYHVMTHQLFAAPVAQHHQQPQQLTSPSSNFWLNSPPGNDFFTFDNWDELGSVVKFVVD* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1410 313 ProSiteProfiles NAC domain profile. 25 189 IPR003441 GO:0003677|GO:0006355
Gso8g1410 313 SUPERFAMILY NAC domain 25 189 IPR036093 GO:0003677|GO:0006355
Gso8g1410 313 Pfam No apical meristem (NAM) protein 27 155 IPR003441 GO:0003677|GO:0006355
Gso8g1410 313 Gene3D NAC domain 34 193 IPR036093 GO:0003677|GO:0006355
Gso8g1410 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 310 - -
Gso8g1410 313 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 11 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1410 Gso-Chr8 13613841 13616682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1410 22 204 NAC Transcription Factor Family AT1G26870 63.587 2.72e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso8g1410 NAM 1.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1410 - - gmx:100808692 640.573