Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1404 ATGGCAGCGCCGAACAGGATCGAACGCGCCCACCAGATGTACCGCGACGGACGTTACGAAGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAACCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTCACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGACTCTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGTTTGAAGACACAATTGGCACTTACTCCAATACCAGAATCAGAAGAAGAGGAGTTTGAAGAACAGGAAGATGAGGAGCCTGAAGTGATATCACAAAGGGAGAATGAAAACGAAGAGATGGGAGAGAAATATTCGTCGATTTCTAATATTGGGACAGATCAAAAGGTTGAGCTTGGCAAAGGTATTATTATTGCTGATTGTGCTCCCCATGAAACAGACCTCAAGTTTTCATCCAAGCAAGGAAGAAACCAAAACAATGAGCCTAAGAAGTCCACAGCAGATGCTATAGCTCCTAAAGCACCAAACAAGGAATCTACCGAGCAACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGACAGTGTTGAAGATGATTCCAGTGATGATGACGATGAAGATGAAGATGAAGAGTCTCTGCCTCAGTACCGATTTCGTGTAAGAACAGTTGGTGTCCGTCCTGTAAAGTGA 846 0.4563 MAAPNRIERAHQMYRDGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLALTPIPESEEEEFEEQEDEEPEVISQRENENEEMGEKYSSISNIGTDQKVELGKGIIIADCAPHETDLKFSSKQGRNQNNEPKKSTADAIAPKAPNKESTEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDEDEDEESLPQYRFRVRTVGVRPVK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1404 281 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Gso8g1404 281 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Gso8g1404 281 MobiDBLite consensus disorder prediction 123 163 - -
Gso8g1404 281 Gene3D Tetratricopeptide repeat domain 2 154 IPR011990 GO:0005515
Gso8g1404 281 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 281 - -
Gso8g1404 281 MobiDBLite consensus disorder prediction 128 147 - -
Gso8g1404 281 MobiDBLite consensus disorder prediction 191 268 - -
Gso8g1404 281 MobiDBLite consensus disorder prediction 248 263 - -
Gso8g1404 281 SMART tpr_5 74 107 IPR019734 GO:0005515
Gso8g1404 281 SMART tpr_5 3 36 IPR019734 GO:0005515
Gso8g1404 281 SMART tpr_5 40 73 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1404 Gso-Chr8 13506161 13508932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1404 2 121 Calmodulin-binding Proteins AT3G25230 32.576 1.56e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1404 - - gmx:100801778 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1404 8 13506161 13508932 Gso8g1404 8 13506161 13508932 ECH