Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g1404 | ATGGCAGCGCCGAACAGGATCGAACGCGCCCACCAGATGTACCGCGACGGACGTTACGAAGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAACCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTCACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGACTCTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGTTTGAAGACACAATTGGCACTTACTCCAATACCAGAATCAGAAGAAGAGGAGTTTGAAGAACAGGAAGATGAGGAGCCTGAAGTGATATCACAAAGGGAGAATGAAAACGAAGAGATGGGAGAGAAATATTCGTCGATTTCTAATATTGGGACAGATCAAAAGGTTGAGCTTGGCAAAGGTATTATTATTGCTGATTGTGCTCCCCATGAAACAGACCTCAAGTTTTCATCCAAGCAAGGAAGAAACCAAAACAATGAGCCTAAGAAGTCCACAGCAGATGCTATAGCTCCTAAAGCACCAAACAAGGAATCTACCGAGCAACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGACAGTGTTGAAGATGATTCCAGTGATGATGACGATGAAGATGAAGATGAAGAGTCTCTGCCTCAGTACCGATTTCGTGTAAGAACAGTTGGTGTCCGTCCTGTAAAGTGA | 846 | 0.4563 | MAAPNRIERAHQMYRDGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLALTPIPESEEEEFEEQEDEEPEVISQRENENEEMGEKYSSISNIGTDQKVELGKGIIIADCAPHETDLKFSSKQGRNQNNEPKKSTADAIAPKAPNKESTEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDEDEDEESLPQYRFRVRTVGVRPVK* | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g1404 | 281 | SUPERFAMILY | TPR-like | 7 | 120 | IPR011990 | GO:0005515 | |
Gso8g1404 | 281 | Pfam | Anaphase-promoting complex, cyclosome, subunit 3 | 17 | 94 | - | - | |
Gso8g1404 | 281 | MobiDBLite | consensus disorder prediction | 123 | 163 | - | - | |
Gso8g1404 | 281 | Gene3D | Tetratricopeptide repeat domain | 2 | 154 | IPR011990 | GO:0005515 | |
Gso8g1404 | 281 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN | 2 | 281 | - | - | |
Gso8g1404 | 281 | MobiDBLite | consensus disorder prediction | 128 | 147 | - | - | |
Gso8g1404 | 281 | MobiDBLite | consensus disorder prediction | 191 | 268 | - | - | |
Gso8g1404 | 281 | MobiDBLite | consensus disorder prediction | 248 | 263 | - | - | |
Gso8g1404 | 281 | SMART | tpr_5 | 74 | 107 | IPR019734 | GO:0005515 | |
Gso8g1404 | 281 | SMART | tpr_5 | 3 | 36 | IPR019734 | GO:0005515 | |
Gso8g1404 | 281 | SMART | tpr_5 | 40 | 73 | IPR019734 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g1404 | Gso-Chr8 | 13506161 | 13508932 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g1404 | 2 | 121 | Calmodulin-binding Proteins | AT3G25230 | 32.576 | 1.56e-13 | 68.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g1404 | - | - | gmx:100801778 | 520.005 |