Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1399 ATGAAGCAGCTCATCCGCCGCCTCTCGCGCGTGGCTGACTCCTCCAACTACACGCTCCTCCGTTCGGACTCCTCCCAGGCCTGCCACCACCGCCGCCCACGCGCCGAGTCCTTCCGTCTCTCCGCCCCATCCAAGATCCGCCGCTCCTCCGCGGCGGTGGTTCCGGAGGGGCACGTCCCGATCTACGTCGGCGACGAGATGGAGCGCTTCGTCGTGTGCGCCGAGCTCCTCAACCACCCCGTCTTCGTCAAGCTCCTCAACGAATCCGCGCAGGAATACGGCTACGAGCAGAAAGGAGTCCTCCGGCTGCCGTGCCGCGTCTTCGTCTTCGAGCGTGTTCTCGACGCGCTTCGTCTCGGACTCAACGCGCGTGACATCACCGAGCTCGTAAATTTCTCGCCGGAAGAGTTTTCCTGA 417 0.6451 MKQLIRRLSRVADSSNYTLLRSDSSQACHHRRPRAESFRLSAPSKIRRSSAAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQKGVLRLPCRVFVFERVLDALRLGLNARDITELVNFSPEEFS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1399 138 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 133 - -
Gso8g1399 138 Pfam Auxin responsive protein 8 117 IPR003676 GO:0009733
Gso8g1399 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1399 Gso-Chr8 13439693 13440611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1399 49 117 Calmodulin-binding Proteins AT2G24400 40.580 3.06e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1399 K14488 - gmx:100806044 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1399 8 13439693 13440611 Gso8g1399 8 13439693 13440611 ECH