Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1374 ATGGAACAATCAAGATTCCAAAACACGGTTCTATACAATAACATGGAACCTAGACATGATGAATACCACCACCCTGGGTCACAGTCAGTGATGCAGGACCATATGGATGGCACACATGCCGGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCCATACAGACAGGTGAAGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCAGGAAGCCTGTATTATCAAATGTCAGTGATTCCAATTATACCCCAGGTTATATGGAATTGAAAGGCATTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATGGTTGACAAATATCCAAAAGAATTTGATAGAATGAATACATCATTACCTGGAGACAGAAGCAACTATGGGTCGATTCGATCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCTGGCTATGGCTCTTTTGGAGTTTATGATAGATCAATGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGCATTCTTCGAATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTACAAATATATAATCAGGTTCATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTTTCTGTGTCCTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTTCTAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCCATGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCAGCATTGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGAATCAAGAAAAAACACAACCATGTTTGGTGTCAGTTTTTCTGCAAATGATATAAATGAATTGGACAGGCAAATTAGTATTGACAGGGAGACTAGTAGAGTTGGTGTAGAATCTATTGCACAAGGTGCTCCCCTGACTAACAATTTTAACTCATCATTGGCTACTCAGTCTTCACCACCAGTGCTACCAACTTCCTCAAATTCTTATGATGCGTATCCACAGTTTTATGGTGATCAAATGATACGCCGTGGGGAACCTAGTGATCAATATATTATTAATCATGGCCTTATTCCTTCTCATAAACCTGTTATTGGAGAGACTCCTATCATTATGCCTCCTCATATGCTTGTTAATCAACAAGGGATTTTGAGTGAAGGCCTTCCACCTCATGGAATACAAGTACAAAATTCAGAAATAGCAGGAACATTTGCAAGCAATCTGGTTGATAGTTCAATTCAACAAGGAAGTGACCCTGGGAAAATTTTTGCCTCAGAATTACCATCAACAGCTCCTGCACAACTGCTTAATAATGGTTACATGAAAAATAATTTTCCTGAAGCATCAGTTGTTGTTACTGCACCAGAGGGGCATTCGTTGCATCCAACAAAGATGGACAAGCTCCCAGATTATGAAGAGACTTCTTCTACATCTAGCAGTGCATTTGGTCCTGCTTATGTTGATTCCCACTACAATGCAGCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCGGAGAGAATTTCACGGGAACAATTAGAGTTGTTGAATCGGTCCTCAAAATCAGATGATACAAACAGTTCTCAGTTTCATGTTTCAGATTTACTTTCTGATGTCAACCCACCAGATTCAGTTACAGAATCTGGTGACAAGTTGCATGGTGGAAATCTGCCTAATCTATCTGAGGAATTAGGCATCACAGGGAAGCCCTTGCATGCAGATGGCTATGCCATTGATAATGGGGCTGTCAATCATCAAATATACAAACAGCTGCCTGATGCAAGCAGTCAGATGAAATCAAAGCTAACTGAGCATGTGAGTCCTGAGTTGAAGCAGGTATCATTGGACAATGGAGGACGCAAAGATTTGTTAAATAAGGATAATGTTGTTGGGTTGGAAACAGAAATTTATAGTATAAATAACTATAACAAACCCCTGATTGATGAGACAAAAACCAGCAAACCAGACTTGCCTATTTTGCACCAGGTCTCTTCTGATAAGCACCTTGATGATCCAGCATCCATTCTTCCAGAAGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGAGGATATTAATGTTCAAGCCTTACCTGTTTCCATAAATGGGAATACAACTACAGATGAAGATTCTGAAGAATTTCCTTCAAATGTTGTTTCCAAACAAGCGCAAGGTGACATCCTTATTGATATTAATGATCGGTTCCCACGTGAATTTTTCACTGATATGTTCTCTAAAGCAGTACTTGAAGAAGATCCCTCTAGTCTGCATCCATTAACTTCAGATGGAGTGGGCTTAAGTGTAAACATGGAAAATCGTGAACCTAAACGATGGTCATATTTTCAAAAATTGGCTCAAGAAGGGATTGATAATGTGTCTCTTATGGACCAGGATCATCTTGATTTTTCACCAGGAAAAGTGGTTGGAGAAAATAGGGCTCAACATGTTAAACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCAGAGTCCCACCTTGATTTTGTTGAAGAAAATATAAGAGACTTGCATGGAAGGATTGGAGCAGAAACCACTGTTCTAAAGTCAAATTATGATCATTCCCAAGTGAACGACACCGAAAGTATGCAATTTGATGTTATGATGGAAAACATAAGAGCACAAGAGTCAGAATATGAGGTTGGGAAGTTTGAAAAAAGGAATAGCAATCTACCTCCTCCTGATCCTTCTTTAGTAGGAGAGTTTGATCCAAGTACCTTCCAGGTCATAATGAATGATGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGGAAATGGCGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAGGCAGAAATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACAATGGCTACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTTTCTGGTGGTGTGCGAGGGACACTTCCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTGAATAACACATTAAGGCCAACAATCCCAGATCATTGTGATTCTGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCTAATCCTGCAGCTAGGCCATCCTTCACAGAAATAGCCAGTCGATTGCGCATAATGACTGCAGCAGCTAGCCAAACCAAAACACAGAAGGCATCTAAATGA 3762 0.4043 MEQSRFQNTVLYNNMEPRHDEYHHPGSQSVMQDHMDGTHAGRRPADLNTSEVKPVLNYSIQTGEEFALEFMRDRVNIRKPVLSNVSDSNYTPGYMELKGILGISHAGSESGSDISMLSMVDKYPKEFDRMNTSLPGDRSNYGSIRSMPRTSLNQDNRQFVPGYGSFGVYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLLDREGSQKLRMFLFSMSDLEDAQFGLSSIGDDSEIQYVVAVNGMDLESRKNTTMFGVSFSANDINELDRQISIDRETSRVGVESIAQGAPLTNNFNSSLATQSSPPVLPTSSNSYDAYPQFYGDQMIRRGEPSDQYIINHGLIPSHKPVIGETPIIMPPHMLVNQQGILSEGLPPHGIQVQNSEIAGTFASNLVDSSIQQGSDPGKIFASELPSTAPAQLLNNGYMKNNFPEASVVVTAPEGHSLHPTKMDKLPDYEETSSTSSSAFGPAYVDSHYNAADLSSLHPPPLPKRVYYSERISREQLELLNRSSKSDDTNSSQFHVSDLLSDVNPPDSVTESGDKLHGGNLPNLSEELGITGKPLHADGYAIDNGAVNHQIYKQLPDASSQMKSKLTEHVSPELKQVSLDNGGRKDLLNKDNVVGLETEIYSINNYNKPLIDETKTSKPDLPILHQVSSDKHLDDPASILPEVDWGDTSVKESNEDINVQALPVSINGNTTTDEDSEEFPSNVVSKQAQGDILIDINDRFPREFFTDMFSKAVLEEDPSSLHPLTSDGVGLSVNMENREPKRWSYFQKLAQEGIDNVSLMDQDHLDFSPGKVVGENRAQHVKPLTTDEVSLNHAESHLDFVEENIRDLHGRIGAETTVLKSNYDHSQVNDTESMQFDVMMENIRAQESEYEVGKFEKRNSNLPPPDPSLVGEFDPSTFQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPDHCDSEWRTLMEQCWAPNPAARPSFTEIASRLRIMTAAASQTKTQKASK* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1374 1253 ProSiteProfiles Protein kinase domain profile. 973 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1374 1253 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Gso8g1374 1253 SUPERFAMILY CAD & PB1 domains 191 279 - -
Gso8g1374 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1253 - -
Gso8g1374 1253 MobiDBLite consensus disorder prediction 17 46 - -
Gso8g1374 1253 ProSitePatterns Protein kinases ATP-binding region signature. 979 1004 IPR017441 GO:0005524
Gso8g1374 1253 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 87 1253 - -
Gso8g1374 1253 Gene3D - 193 276 - -
Gso8g1374 1253 Pfam Protein tyrosine and serine/threonine kinase 974 1236 IPR001245 GO:0004672|GO:0006468
Gso8g1374 1253 Coils Coil 878 898 - -
Gso8g1374 1253 PRINTS Tyrosine kinase catalytic domain signature 1055 1068 IPR001245 GO:0004672|GO:0006468
Gso8g1374 1253 PRINTS Tyrosine kinase catalytic domain signature 1092 1110 IPR001245 GO:0004672|GO:0006468
Gso8g1374 1253 PRINTS Tyrosine kinase catalytic domain signature 1163 1185 IPR001245 GO:0004672|GO:0006468
Gso8g1374 1253 PRINTS Tyrosine kinase catalytic domain signature 1207 1229 IPR001245 GO:0004672|GO:0006468
Gso8g1374 1253 Gene3D Phosphorylase Kinase; domain 1 966 1060 - -
Gso8g1374 1253 SMART PB1_new 189 276 IPR000270 GO:0005515
Gso8g1374 1253 MobiDBLite consensus disorder prediction 568 608 - -
Gso8g1374 1253 CDD PB1_UP2 178 274 - -
Gso8g1374 1253 Gene3D Transferase(Phosphotransferase) domain 1 1061 1253 - -
Gso8g1374 1253 MobiDBLite consensus disorder prediction 501 526 - -
Gso8g1374 1253 MobiDBLite consensus disorder prediction 570 595 - -
Gso8g1374 1253 CDD STKc_MAP3K-like 979 1236 - -
Gso8g1374 1253 SUPERFAMILY Protein kinase-like (PK-like) 960 1236 IPR011009 -
Gso8g1374 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1098 1110 IPR008271 GO:0004672|GO:0006468
Gso8g1374 1253 SMART serkin_6 973 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1374 Gso-Chr8 13172651 13181763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1374 1 584 MAP Kinase Kinase Kinase AT1G16270 37.670 1.52e-89 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso8g1374 PK_Tyr_Ser-Thr 5.8e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1374 - - gmx:100799639 2488.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1374 8 13172651 13181763 Gso15g2150 15 49504388 49513960 GST