Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1373 ATGCAGAAACATCAATACAATTCCATGGAACCTCGAAATGAGGAATTCCATTCTGCACCACAGTTGGTCCCGCAAGACCTTCGTGATGGCATGCATATCAATGCACGACCTCCGCCATTTAATATGTCAGAAAATAAACCTGTACTTAATTACTCCATACAGACTGGTGAGGAATTTGCTCTCGAGTTTATGAGAGATAGGGTGAATCTCAGGAAGCCTGCCTTTCCAAATGTTGTGGGTGATCCCAATTATTCAACAGGCTATATGGAATTGAAAGGCATTTTGGGCCACCCTGGATCAGAGAGTGGATCAGATATTTCTGTGCTCACAAAGGTTGAAAAGGGTCCAAAAGAGTTTGACAGAAGGAACTCTTCTCAACACCAGGACAGAAGTAATTATGGTTCAGCTCAATCCATTCCTAGATCTTCATCTAATCAAGACAGTTACCGAGTTCTTCATGGTACTTCCTCTTCTAGTGTTTCTGAAAGCGCATCAATGAAGATGAAGGTTCTATGCAGCTTTGGCGGTAAAATATTGCCACGGCCTAGTGATGGAAAGCTTAGATATGTTGGGGGTGAAACGCGTATTATTAGTATAAGACGGGACATACGTTTTCATGAGCTTATGCTTAAAACATCATCCATCTATAATGAAACTCATGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCATTGGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAGGCGGCCGAGAATCAAATAAGCTTAGGATTTTTCTGTTATCTATGAATGATTTGGATGATACTCAGTTCGGTATAGGTAGCATGGATGGTGATTCTGAAATTCAGTATGTCGTTGCTGTTAATGGTATGGGCATGGGTTCAAGAAACAACTCAATCCTTCGTGGTGAAAGTGGCTCTACTAATAACTTACATGAATTGAATGGACACAATAATGAGAGGGAGACCAACAGAGTTCTCATGGACACATTTGGTGTTAGCAGTTCATCCTTGACTGACAATGTTAAACCATCACTGGCTATTCAATCTTCACAACCAGTGCTTCCAATCTCCTCTAATGCTTATGAAACCCATCCATTGTTTTATGATGAGCAGATTATTCACCACGGGGAAGCTAGTCATTATCCACTACAGCATGGCCTTGGTCCTTCTAACAACTCCGCTCACAATCTTGAAGAGATTCCAGTTTCTATGCCAACTCATGGCCTTGTCAACCAAGGAATCATGAATGATGGACAAGCATCCAGTCAGTTGCAGGTACAAATTTCAGCTATGCCAGAAACGCTGGTGAAAAGAAAGGGTGATAATTTCATTCATACAGGCAATGACCCAGGAAAAGTTTTCCCCTTGGAAGCACCATATCCTATTCCTTTGCAGCCATTTGAGGGCAATTTGCATGCTAATATATCAGATGCTTCAGCTACAGCTGCTATATCAGAAGGGCTTCATCCTGCATTACCATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAGATGCCTCTTCATTAATTAGTAGTATGAATCCCACACAGACTCCCAAGTCTGTTGAAGATGACTTCTTTACTACAGCCACTGATGCATTCAGCCATGCTCATGTTGATGCCGAGTCCAATGTAATTGATTTCAGTTACCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCAGATTTGCTGAACCGATCTACAAAGTCAGATGATGCTCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAAAATTCAATTACAGAATCCACTGACATGTTGCACAATGGGAATACATCAAATCTGAACATGATGTCCAGCTCAGCAGGAAAGCCTTTGCAAGCAGATGGCCATACCATTGATGATGGATTTGCCCCGCCACAGACATACAAACAGTTGCCTGATACAACAATTAAGGTGAATCCAAAGTTATCACAGCATGTGAATTCTGAGTCGAAGCAAGTGCTAGAAGATAATAAAGTTTCTAGAAATGAGGATCAGGTTCTTAGTTCTGAAAACGAAACCAAAGGCACCGAACATCTTGCATTTCATCAAGTTCCTTCTGTTGAACAAAATCAGAATCTAGCATCTAAACTTCCAGACCTCAATTTGGCTGAGGTTTCTACCAGGGAGTCTGATAATGATACTAAGGTCCAATCCCAGACTTTTCCTTTAACTGGAAACACAGGCCAAGATGTTTCTCAAGATTTTCCCCCAGAAGCTAAATCCAGACCTACTCAGGGTGACATTCTGATTGATATCGAGGACAGGTTTCCCCGTGATTTCCTTTATGACATGTTCTCCAAAGCAATAATTTCTGAAGATTCCTCAAGCATTGGTCCATTACCAACAGATAGAGCAGGTTTGAGCTTAAATATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTGGCTCTAGAGGGGTTTGATAATGTATCTCTAATTGATCAGGATAATCTTGGTTTTTCGTCTGCTGTGAGAAAAGTACAAGAGGGGGATAGTAAATCTCAGCCATCTGCTCCTCAACCAGCTGGTGGTGTTTTGGCAGGACGCACAGATTCCCACCTAAATATTGGTGAAGAAAATCAGAAAAATGTACCTGTAGCAACTAAAACAGAAGCAAGTATCTTTCACCAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACATGGATGCCATAATGGAAAACATACGACCACAGGAGTCTGAATACCAGGATGACAAGAATGAACCGAGGAATGTGGTTGTAGCAGGGGAATTTGACACCAGTACTGTGCAGTTCATAAAGAATGAAGATCTTGAAGAGTTGCGAGAGCTGGGTTCTGGTACATTTGGGACTGTGTACCATGGAAAATGGAGAGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGCTGCTTCGCTGGTCGATCTTCAGAACAAGAAAGATTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTTACCGAGTTCATGGTGGATGGTTCTCTTAGGAATGTTTTGCTTCGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCTGCTTTCGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTCGTGAACTTGAAGGATCCTATACGGCCAATATGCAAGGTTGGCGATTTTGGCCTATCAAAGATTAAGCGAAATACCTTGGTGTCTGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTAAATGGTAGTAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTCTTATGGGAGATTCTTACTGGTGATGAGCCATATGCTAATATGCACTATGGCGCAATCATAGGAGGCATTGTGAATAACACATTAAGACCTACAATCCCTAGTTATTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCTAATCCAGCAGTAAGGCCATCCTTTGCCGAAATTGCTCGCCGCTTGCGTGTGATGTCTGCAGCCGCTAGTCAGATCAAAGGACAGGGCCACAAGGCATCTAAATGA 3738 0.4203 MQKHQYNSMEPRNEEFHSAPQLVPQDLRDGMHINARPPPFNMSENKPVLNYSIQTGEEFALEFMRDRVNLRKPAFPNVVGDPNYSTGYMELKGILGHPGSESGSDISVLTKVEKGPKEFDRRNSSQHQDRSNYGSAQSIPRSSSNQDSYRVLHGTSSSSVSESASMKMKVLCSFGGKILPRPSDGKLRYVGGETRIISIRRDIRFHELMLKTSSIYNETHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGGRESNKLRIFLLSMNDLDDTQFGIGSMDGDSEIQYVVAVNGMGMGSRNNSILRGESGSTNNLHELNGHNNERETNRVLMDTFGVSSSSLTDNVKPSLAIQSSQPVLPISSNAYETHPLFYDEQIIHHGEASHYPLQHGLGPSNNSAHNLEEIPVSMPTHGLVNQGIMNDGQASSQLQVQISAMPETLVKRKGDNFIHTGNDPGKVFPLEAPYPIPLQPFEGNLHANISDASATAAISEGLHPALPSKNKGKHQQSEDASSLISSMNPTQTPKSVEDDFFTTATDAFSHAHVDAESNVIDFSYLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSITESTDMLHNGNTSNLNMMSSSAGKPLQADGHTIDDGFAPPQTYKQLPDTTIKVNPKLSQHVNSESKQVLEDNKVSRNEDQVLSSENETKGTEHLAFHQVPSVEQNQNLASKLPDLNLAEVSTRESDNDTKVQSQTFPLTGNTGQDVSQDFPPEAKSRPTQGDILIDIEDRFPRDFLYDMFSKAIISEDSSSIGPLPTDRAGLSLNMDNHEPKRWSYFQNLALEGFDNVSLIDQDNLGFSSAVRKVQEGDSKSQPSAPQPAGGVLAGRTDSHLNIGEENQKNVPVATKTEASIFHQKYEHSQLKGNENKNMDAIMENIRPQESEYQDDKNEPRNVVVAGEFDTSTVQFIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEFMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPIRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGDEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFAEIARRLRVMSAAASQIKGQGHKASK* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1373 1245 PANTHER SERINE-THREONINE PROTEIN KINASE 81 1245 - -
Gso8g1373 1245 ProSiteProfiles Protein kinase domain profile. 963 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1373 1245 SUPERFAMILY Protein kinase-like (PK-like) 952 1225 IPR011009 -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 1 20 - -
Gso8g1373 1245 SMART serkin_6 963 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g1373 1245 SUPERFAMILY CAD & PB1 domains 183 275 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 128 158 - -
Gso8g1373 1245 CDD STKc_MAP3K-like 969 1226 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 737 759 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 731 768 - -
Gso8g1373 1245 SMART PB1_new 182 269 IPR000270 GO:0005515
Gso8g1373 1245 MobiDBLite consensus disorder prediction 653 675 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 676 700 - -
Gso8g1373 1245 CDD PB1_UP2 171 266 - -
Gso8g1373 1245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1088 1100 IPR008271 GO:0004672|GO:0006468
Gso8g1373 1245 Pfam Protein tyrosine and serine/threonine kinase 964 1226 IPR001245 GO:0004672|GO:0006468
Gso8g1373 1245 ProSitePatterns Protein kinases ATP-binding region signature. 969 994 IPR017441 GO:0005524
Gso8g1373 1245 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 81 1245 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 510 529 - -
Gso8g1373 1245 Gene3D - 186 270 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 116 158 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 630 700 - -
Gso8g1373 1245 Pfam PB1 domain 184 266 IPR000270 GO:0005515
Gso8g1373 1245 Gene3D Phosphorylase Kinase; domain 1 949 1049 - -
Gso8g1373 1245 Gene3D Transferase(Phosphotransferase) domain 1 1050 1244 - -
Gso8g1373 1245 PRINTS Tyrosine kinase catalytic domain signature 1045 1058 IPR001245 GO:0004672|GO:0006468
Gso8g1373 1245 PRINTS Tyrosine kinase catalytic domain signature 1082 1100 IPR001245 GO:0004672|GO:0006468
Gso8g1373 1245 PRINTS Tyrosine kinase catalytic domain signature 1153 1175 IPR001245 GO:0004672|GO:0006468
Gso8g1373 1245 PRINTS Tyrosine kinase catalytic domain signature 1197 1219 IPR001245 GO:0004672|GO:0006468
Gso8g1373 1245 MobiDBLite consensus disorder prediction 496 529 - -
Gso8g1373 1245 MobiDBLite consensus disorder prediction 854 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1373 Gso-Chr8 13163462 13171512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1373 5 618 MAP Kinase Kinase Kinase AT1G16270 38.739 2.16e-101 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso8g1373 PK_Tyr_Ser-Thr 1.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1373 - - gmx:100799118 2478.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1373 8 13163462 13171512 Gso15g2151 15 49515121 49523211 GST